Bio Cultre System!

-Added the Bio Cultre System
-Added the Bio Vat, Bio Lab and custom Glas types
-Updated Copyright on the Files
-Added a shitton of ressources
-Added an API to for the Bio Cultre System
-Added a Phyton Script for the ease of adding Glas Types to the Bio Vat
-Fixed Spawning on custom blocks
-Fixed Nuggets giving out boni in the windmill
-Fixed tooltip again for the Windmill
-Added dimensionsIDs to the BlockCoord class
-Added apiJar, sourceJar, devJar to the grandlew output

71 files changed, 6866 insertions, 629 deletions

diff --git a/src/main/java/com/github/bartimaeusnek/bartworks/API/API_REFERENCE.java b/src/main/java/com/github/bartimaeusnek/bartworks/API/API_REFERENCE.java
new file mode 100644
index 0000000000..2767d56168
--- /dev/null
+++ b/src/main/java/com/github/bartimaeusnek/bartworks/API/API_REFERENCE.java
@@ -0,0 +1,27 @@
+/*
+ * Copyright (c) 2019 bartimaeusnek
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ *
+ * The above copyright notice and this permission notice shall be included in all
+ * copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ * SOFTWARE.
+ */
+
+package com.github.bartimaeusnek.bartworks.API;
+
+public final class API_REFERENCE {
+    public static final String VERSION = "@version@";
+}
diff --git a/src/main/java/com/github/bartimaeusnek/bartworks/API/BioObjectAdder.java b/src/main/java/com/github/bartimaeusnek/bartworks/API/BioObjectAdder.java
new file mode 100644
index 0000000000..e0e332fab1
--- /dev/null
+++ b/src/main/java/com/github/bartimaeusnek/bartworks/API/BioObjectAdder.java
@@ -0,0 +1,125 @@
+/*
+ * Copyright (c) 2019 bartimaeusnek
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ *
+ * The above copyright notice and this permission notice shall be included in all
+ * copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ * SOFTWARE.
+ */
+
+package com.github.bartimaeusnek.bartworks.API;
+
+import com.github.bartimaeusnek.bartworks.util.BioCulture;
+import com.github.bartimaeusnek.bartworks.util.BioDNA;
+import com.github.bartimaeusnek.bartworks.util.BioData;
+import com.github.bartimaeusnek.bartworks.util.BioPlasmid;
+import net.minecraft.item.EnumRarity;
+
+import java.awt.*;
+
+public final class BioObjectAdder {
+
+//    @Deprecated
+//    public static BioCulture createAndRegisterBioCulture(Color color, String name, long ID, BioPlasmid plasmid, BioDNA dna, EnumRarity rarity){
+//        return BioCulture.createAndRegisterBioCulture(color,name,ID,plasmid,dna,rarity);
+//    }
+
+    /**
+     * @param color     the color of the Culture
+     * @param name      the name of the Culture
+     * @param plasmid   the cultures plasmid, get it from createAndRegisterBioPlasmid
+     * @param dna       the cultures dna, get it from createAndRegisterBioDNA
+     * @param breedable if the culture can be inserted into the BacterialVat
+     * @param rarity    visual
+     * @return
+     */
+    public static BioCulture createAndRegisterBioCulture(Color color, String name, BioPlasmid plasmid, BioDNA dna, EnumRarity rarity, boolean breedable) {
+        return BioCulture.createAndRegisterBioCulture(color, name, plasmid, dna, rarity, breedable);
+    }
+
+    /**
+     * rarity inherits from dna
+     *
+     * @param color     the color of the Culture
+     * @param name      the name of the Culture
+     * @param plasmid   the cultures plasmid, get it from createAndRegisterBioPlasmid
+     * @param dna       the cultures dna, get it from createAndRegisterBioDNA
+     * @param breedable if the culture can be inserted into the BacterialVat
+     * @return
+     */
+    public static BioCulture createAndRegisterBioCulture(Color color, String name, BioPlasmid plasmid, BioDNA dna, boolean breedable) {
+        return BioCulture.createAndRegisterBioCulture(color, name, plasmid, dna, breedable);
+    }
+
+    /**
+     * unspecific Biodata that can be converted into DNA and Plasmid with the propper methodes
+     *
+     * @param aName  the name of the Biodata
+     * @param rarity visual only
+     * @param chance the chanche to extract this BioData
+     * @param tier   the tier of this BioData 0=HV, 1=EV etc.
+     * @return
+     */
+    public static BioData createAndRegisterBioData(String aName, EnumRarity rarity, int chance, int tier) {
+        return BioData.createAndRegisterBioData(aName, rarity, chance, tier);
+    }
+
+    /**
+     * Default Constructor for HV Tier DNA with 75% extraction rate
+     *
+     * @param aName  Name of the DNA String
+     * @param rarity visual
+     * @return
+     */
+    public static BioDNA createAndRegisterBioDNA(String aName, EnumRarity rarity) {
+        return BioDNA.createAndRegisterBioDNA(aName, rarity);
+    }
+
+    /**
+     * Default Constructor for HV Tier Plasmid with 75% extraction rate
+     *
+     * @param aName  Name of the Plasmid
+     * @param rarity visual
+     * @return
+     */
+    public static BioPlasmid createAndRegisterBioPlasmid(String aName, EnumRarity rarity) {
+        return BioPlasmid.createAndRegisterBioPlasmid(aName, rarity);
+    }
+
+    /**
+     * @param aName  Name of the DNA String
+     * @param rarity visual
+     * @param chance chanche of extracting
+     * @param tier   tier needed to extract 0=HV, 1=EV etc.
+     * @return
+     */
+    public static BioDNA createAndRegisterBioDNA(String aName, EnumRarity rarity, int chance, int tier) {
+        return BioDNA.createAndRegisterBioDNA(aName, rarity, chance, tier);
+    }
+
+    /**
+     * @param aName  Name of the Plasmid
+     * @param rarity visual
+     * @param chance chanche of extracting
+     * @param tier   tier needed to extract 0=HV, 1=EV etc.
+     * @return
+     */
+    public static BioPlasmid createAndRegisterBioPlasmid(String aName, EnumRarity rarity, int chance, int tier) {
+        return BioPlasmid.createAndRegisterBioPlasmid(aName, rarity, chance, tier);
+    }
+
+
+}
diff --git a/src/main/java/com/github/bartimaeusnek/bartworks/API/BioObjectGetter.java b/src/main/java/com/github/bartimaeusnek/bartworks/API/BioObjectGetter.java
new file mode 100644
index 0000000000..86ec61c138
--- /dev/null
+++ b/src/main/java/com/github/bartimaeusnek/bartworks/API/BioObjectGetter.java
@@ -0,0 +1,122 @@
+/*
+ * Copyright (c) 2019 bartimaeusnek
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ *
+ * The above copyright notice and this permission notice shall be included in all
+ * copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ * SOFTWARE.
+ */
+
+package com.github.bartimaeusnek.bartworks.API;
+
+import com.github.bartimaeusnek.bartworks.common.loaders.BioItemList;
+import com.github.bartimaeusnek.bartworks.util.BioCulture;
+import com.github.bartimaeusnek.bartworks.util.BioDNA;
+import com.github.bartimaeusnek.bartworks.util.BioData;
+import com.github.bartimaeusnek.bartworks.util.BioPlasmid;
+import net.minecraft.item.ItemStack;
+import net.minecraft.nbt.NBTTagCompound;
+
+import java.util.Collection;
+
+public final class BioObjectGetter {
+
+    public static BioCulture getBioCulture(String aName) {
+        return BioCulture.getBioCulture(aName);
+    }
+
+    public static NBTTagCompound getNBTTagFromCulture(BioCulture bioCulture) {
+        return BioCulture.getNBTTagFromCulture(bioCulture);
+    }
+
+    public static NBTTagCompound getNBTTagFromBioPlasmid(BioPlasmid bioPlasmid) {
+        return getNBTTagFromBioData(convertBioPlasmidToData(bioPlasmid));
+    }
+
+    public static NBTTagCompound getNBTTagFromBioDNA(BioDNA bioDNA) {
+        return getNBTTagFromBioData(convertBioDNAtoData(bioDNA));
+    }
+
+    public static NBTTagCompound getNBTTagFromBioData(BioData bioData) {
+        return BioData.getNBTTagFromBioData(bioData);
+    }
+
+    public static BioDNA convertDataToDNA(BioData bioData) {
+        return BioDNA.convertDataToDNA(bioData);
+    }
+
+    public static BioPlasmid convertDataToPlasmid(BioData bioData) {
+        return BioPlasmid.convertDataToPlasmid(bioData);
+    }
+
+    public static BioData convertBioPlasmidToData(BioPlasmid bioPlasmid) {
+        return BioData.convertBioPlasmidToBioData(bioPlasmid);
+    }
+
+    public static BioData convertDataToDNA(BioDNA bioData) {
+        return BioData.convertBioDNAToBioData(bioData);
+    }
+
+    public static BioData convertBioDNAtoData(BioDNA bioDNA) {
+        return BioData.convertBioDNAToBioData(bioDNA);
+    }
+
+    public static BioPlasmid convertBioDNAtoBioPlasmid(BioDNA bioDNA) {
+        return convertDataToPlasmid(convertBioDNAtoData(bioDNA));
+    }
+
+    public static BioDNA convertBioPlasmidtoBioDNA(BioPlasmid bioPlasmid) {
+        return convertDataToDNA(convertBioPlasmidToData(bioPlasmid));
+    }
+
+    public static Collection<ItemStack> getAllPetriDishes() {
+        return BioItemList.getAllPetriDishes();
+    }
+
+    public static Collection<ItemStack> getAllDNASampleFlasks() {
+        return BioItemList.getAllDNASampleFlasks();
+    }
+
+    public static Collection<ItemStack> getAllPlasmidCells() {
+        return BioItemList.getAllPlasmidCells();
+    }
+
+    public static ItemStack getDNASampleFlask(BioDNA dna) {
+        return BioItemList.getDNASampleFlask(dna);
+    }
+
+    public static ItemStack getPetriDish(BioCulture culture) {
+        return BioItemList.getPetriDish(culture);
+    }
+
+    public static ItemStack getPlasmidCell(BioPlasmid plasmid) {
+        return BioItemList.getPlasmidCell(plasmid);
+    }
+
+    /**
+     * 1 - DetergentPowder
+     * 2 - Agarose
+     * 3 - IncubationModule
+     * 4 - Plasma Membrane
+     *
+     * @param selection
+     * @return the selected Item
+     */
+    public static ItemStack getOther(int selection) {
+        return BioItemList.getOther(selection);
+    }
+
+}
diff --git a/src/main/java/com/github/bartimaeusnek/bartworks/API/BioRecipeAdder.java b/src/main/java/com/github/bartimaeusnek/bartworks/API/BioRecipeAdder.java
new file mode 100644
index 0000000000..0f81d266f0
--- /dev/null
+++ b/src/main/java/com/github/bartimaeusnek/bartworks/API/BioRecipeAdder.java
@@ -0,0 +1,124 @@
+/*
+ * Copyright (c) 2019 bartimaeusnek
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without l