Move gradle-integration-tests to new module

106 files changed, 2319 insertions, 0 deletions

diff --git a/integration-tests/build.gradle b/integration-tests/build.gradle
new file mode 100644
index 00000000..23d232d2
--- /dev/null
+++ b/integration-tests/build.gradle
@@ -0,0 +1,7 @@
+subprojects {
+    buildscript {
+        dependencies {
+            classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$kotlin_version"
+        }
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/android-licenses/android-sdk-license b/integration-tests/gradle-integration-tests/android-licenses/android-sdk-license
new file mode 100644
index 00000000..c311cf48
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/android-licenses/android-sdk-license
@@ -0,0 +1,2 @@
+
+d56f5187479451eabf01fb78af6dfcb131a6481e
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/android-licenses/android-sdk-preview-license b/integration-tests/gradle-integration-tests/android-licenses/android-sdk-preview-license
new file mode 100644
index 00000000..da4552d2
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/android-licenses/android-sdk-preview-license
@@ -0,0 +1,2 @@
+
+84831b9409646a918e30573bab4c9c91346d8abd
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/build.gradle b/integration-tests/gradle-integration-tests/build.gradle
new file mode 100644
index 00000000..bbbf2e33
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/build.gradle
@@ -0,0 +1,59 @@
+apply plugin: 'kotlin'
+
+sourceCompatibility = 1.8
+
+tasks.withType(org.jetbrains.kotlin.gradle.tasks.KotlinCompile).all {
+    kotlinOptions {
+        freeCompilerArgs += "-Xjsr305=strict"
+        languageVersion = language_version
+        apiVersion = language_version
+        jvmTarget = "1.8"
+    }
+}
+
+configurations {
+    dokkaPlugin
+    dokkaFatJar
+    kotlinGradle
+}
+
+dependencies {
+
+    testCompileOnly group: 'org.jetbrains.kotlin', name: 'kotlin-stdlib', version: kotlin_for_gradle_runtime_version
+    testCompile group: 'org.jetbrains.kotlin', name: 'kotlin-test-junit', version: kotlin_for_gradle_runtime_version
+    testCompile ideaRT()
+
+    dokkaPlugin project(path: ':runners:gradle-plugin', configuration: 'shadow')
+    dokkaFatJar project(path: ":runners:fatjar", configuration: 'shadow')
+
+    kotlinGradle "org.jetbrains.kotlin:kotlin-gradle-plugin"
+
+    testCompile group: 'junit', name: 'junit', version: '4.12'
+    testCompile gradleTestKit()
+}
+
+
+
+task createClasspathManifest {
+    def outputDir = file("$buildDir/$name")
+
+    inputs.files(configurations.dokkaPlugin + configurations.dokkaFatJar)
+    outputs.dir outputDir
+
+    doLast {
+        outputDir.mkdirs()
+        file("$outputDir/dokka-plugin-classpath.txt").text = configurations.dokkaPlugin.join("\n")
+        file("$outputDir/fatjar.txt").text = configurations.dokkaFatJar.join("\n")
+        file("$outputDir/kotlin-gradle.txt").text = configurations.kotlinGradle.join("\n")
+    }
+}
+
+
+createClasspathManifest.mustRunAfter project(":runners:fatjar").getTasksByName("shadowJar", true)
+testClasses.dependsOn project(":runners:fatjar").shadowJar
+testClasses.dependsOn createClasspathManifest
+
+test {
+    systemProperty "android.licenses.overwrite", project.findProperty("android.licenses.overwrite") ?: ""
+    inputs.dir(file('testData'))
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AbstractAndroidAppTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AbstractAndroidAppTest.kt
new file mode 100644
index 00000000..c3fe2ea9
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AbstractAndroidAppTest.kt
@@ -0,0 +1,51 @@
+package org.jetbrains.dokka.gradle
+
+import org.gradle.testkit.runner.TaskOutcome
+import kotlin.test.assertEquals
+
+abstract class AbstractAndroidAppTest(val testDataRootPath: String) : AbstractDokkaAndroidGradleTest() {
+
+    fun prepareTestData() {
+        val testDataRoot = testDataFolder.resolve(testDataRootPath)
+        val tmpRoot = testProjectDir.root.toPath()
+
+        testDataRoot.resolve("app").copy(tmpRoot.resolve("app"))
+        testDataRoot.resolve("build.gradle").copy(tmpRoot.resolve("build.gradle"))
+        testDataRoot.resolve("settings.gradle").copy(tmpRoot.resolve("settings.gradle"))
+
+        androidLocalProperties?.copy(tmpRoot.resolve("local.properties"))
+    }
+
+
+    data class AndroidPluginParams(val pluginVersion: String, val buildToolsVersion: String, val compileSdk: Int) {
+        fun asArguments(): List<String> = listOf(
+                "-Pabt_plugin_version=$pluginVersion",
+                "-Pabt_version=$buildToolsVersion",
+                "-Psdk_version=$compileSdk"
+        )
+    }
+
+
+    protected fun doTest(gradleVersion: String, kotlinVersion: String, androidPluginParams: AndroidPluginParams) {
+        prepareTestData()
+
+        val result = configure(gradleVersion, kotlinVersion,
+                arguments = arrayOf("dokka", "--stacktrace") + androidPluginParams.asArguments())
+                .build()
+
+        println(result.output)
+
+        assertEquals(TaskOutcome.SUCCESS, result.task(":app:dokka")?.outcome)
+
+        val docsOutput = "app/build/dokka"
+
+        checkOutputStructure("$testDataRootPath/fileTree.txt", docsOutput)
+
+        checkNoErrorClasses(docsOutput)
+        checkNoUnresolvedLinks(docsOutput)
+
+        checkExternalLink(docsOutput, "<span class=\"identifier\">Activity</span>",
+                """<a href="https://developer.android.com/reference/android/app/Activity.html"><span class="identifier">Activity</span></a>""")
+    }
+
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AbstractDokkaAndroidGradleTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AbstractDokkaAndroidGradleTest.kt
new file mode 100644
index 00000000..334fc7c8
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AbstractDokkaAndroidGradleTest.kt
@@ -0,0 +1,45 @@
+package org.jetbrains.dokka.gradle
+
+import org.junit.BeforeClass
+import java.io.File
+
+abstract class AbstractDokkaAndroidGradleTest : AbstractDokkaGradleTest() {
+
+    override val pluginClasspath: List<File> = pluginClasspathData.toFile().readLines().map { File(it) }
+
+    companion object {
+
+        @JvmStatic
+        @BeforeClass
+        fun acceptAndroidSdkLicenses() {
+            val sdkDir = androidLocalProperties?.toFile()?.let {
+                val lines = it.readLines().map { it.trim() }
+                val sdkDirLine = lines.firstOrNull { "sdk.dir" in it }
+                sdkDirLine?.substringAfter("=")?.trim()
+            } ?: System.getenv("ANDROID_HOME")
+
+            if (sdkDir == null || sdkDir.isEmpty()) {
+                error("Android SDK home not set, " +
+                        "try setting \$ANDROID_HOME " +
+                        "or sdk.dir in runners/gradle-integration-tests/testData/android.local.properties")
+            }
+            val sdkDirFile = File(sdkDir)
+            if (!sdkDirFile.exists()) error("\$ANDROID_HOME and android.local.properties points to non-existing location")
+            val sdkLicensesDir = sdkDirFile.resolve("licenses")
+
+            val acceptedLicenses = File("android-licenses")
+            acceptedLicenses.listFiles().forEach { licenseFile ->
+                val target = sdkLicensesDir.resolve(licenseFile.name)
+                if(!target.exists() || target.readText() != licenseFile.readText()) {
+                    val overwrite = System.getProperty("android.licenses.overwrite", "false")!!.toBoolean()
+                    if (!target.exists() || overwrite) {
+                        licenseFile.copyTo(target, true)
+                        println("Accepted ${licenseFile.name}, by copying $licenseFile to $target")
+                    }
+                }
+
+            }
+        }
+
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AbstractDokkaGradleTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AbstractDokkaGradleTest.kt
new file mode 100644
index 00000000..4814e707
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AbstractDokkaGradleTest.kt
@@ -0,0 +1,108 @@
+package org.jetbrains.dokka.gradle
+
+
+import com.intellij.rt.execution.junit.FileComparisonFailure
+import org.gradle.testkit.runner.GradleRunner
+import org.junit.Rule
+import org.junit.rules.TemporaryFolder
+import java.io.File
+import java.nio.file.Files
+import java.nio.file.Path
+import java.nio.file.Paths
+
+
+val testDataFolder: Path = Paths.get("testData")
+
+val pluginClasspathData: Path = Paths.get("build", "createClasspathManifest", "dokka-plugin-classpath.txt")
+
+val dokkaFatJarPathData: Path = pluginClasspathData.resolveSibling("fatjar.txt")
+
+val androidLocalProperties = testDataFolder.resolve("android.local.properties").let { if (Files.exists(it)) it else null }
+
+abstract class AbstractDokkaGradleTest {
+    @get:Rule val testProjectDir = TemporaryFolder()
+
+    open val pluginClasspath: List<File> = pluginClasspathData.toFile().readLines().map { File(it) }
+
+    fun checkOutputStructure(expected: String, actualSubpath: String) {
+        val expectedPath = testDataFolder.resolve(expected)
+        val actualPath = testProjectDir.root.toPath().resolve(actualSubpath).normalize()
+
+        assertEqualsIgnoringSeparators(expectedPath.toFile(), buildString {
+            actualPath.toFile().writeStructure(this, File(actualPath.toFile(), "."))
+        })
+    }
+
+    fun checkNoErrorClasses(actualSubpath: String, extension: String = "html", errorClassMarker: String = "ERROR CLASS") {
+        val actualPath = testProjectDir.root.toPath().resolve(actualSubpath).normalize()
+        var checked = 0
+        Files.walk(actualPath).filter { Files.isRegularFile(it) && it.fileName.toString().endsWith(".$extension") }.forEach {
+            val text = it.toFile().readText()
+
+            val noErrorClasses = text.replace(errorClassMarker, "?!")
+
+            if (noErrorClasses != text) {
+                throw FileComparisonFailure("", noErrorClasses, text, null)
+            }
+
+            checked++
+        }
+        println("$checked files checked for error classes")
+    }
+
+    fun checkNoUnresolvedLinks(actualSubpath: String, extension: String = "html", marker: Regex = "[\"']#[\"']".toRegex()) {
+        val actualPath = testProjectDir.root.toPath().resolve(actualSubpath).normalize()
+        var checked = 0
+        Files.walk(actualPath).filter { Files.isRegularFile(it) && it.fileName.toString().endsWith(".$extension") }.forEach {
+            val text = it.toFile().readText()
+
+            val noErrorClasses = text.replace(marker, "?!")
+
+            if (noErrorClasses != text) {
+                throw FileComparisonFailure("", noErrorClasses, text, null)
+            }
+
+            checked++
+        }
+        println("$checked files checked for unresolved links")
+    }
+
+    fun checkExternalLink(actualSubpath: String, linkBody: String, fullLink: String, extension: String = "html") {
+        val match = "!!match!!"
+        val notMatch = "!!not-match!!"
+
+        val actualPath = testProjectDir.root.toPath().resolve(actualSubpath).normalize()
+        var checked = 0
+        var totalEntries = 0
+        Files.walk(actualPath).filter { Files.isRegularFile(it) && it.fileName.toString().endsWith(".$extension") }.forEach {
+            val text = it.toFile().readText()
+
+            val textWithoutMatches = text.replace(fullLink, match)
+
+            val textWithoutNonMatches = textWithoutMatches.replace(linkBody, notMatch)
+
+            if (textWithoutNonMatches != textWithoutMatches) {
+
+                val expected = textWithoutNonMatches.replace(notMatch, fullLink).replace(match, fullLink)
+                val actual = textWithoutMatches.replace(match, fullLink)
+
+                throw FileComparisonFailure("", expected, actual, null)
+            }
+            if (text != textWithoutMatches)
+                totalEntries++
+
+            checked++
+        }
+        println("$checked files checked for valid external links '$linkBody', found $totalEntries links")
+    }
+
+    fun configure(gradleVersion: String = "3.5", kotlinVersion: String = "1.1.2", arguments: Array<String>): GradleRunner {
+        val fatjar = dokkaFatJarPathData.toFile().readText()
+
+        return GradleRunner.create().withProjectDir(testProjectDir.root)
+                .withArguments("-Pdokka_fatjar=$fatjar", "-Ptest_kotlin_version=$kotlinVersion", *arguments)
+                .withPluginClasspath(pluginClasspath)
+                .withGradleVersion(gradleVersion)
+                .withDebug(true)
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AndroidAppTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AndroidAppTest.kt
new file mode 100644
index 00000000..bbb63909
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AndroidAppTest.kt
@@ -0,0 +1,25 @@
+package org.jetbrains.dokka.gradle
+
+import org.junit.Test
+
+class AndroidAppTest : AbstractAndroidAppTest("androidApp") {
+    @Test
+    fun `test kotlin 1_1_2-5 and gradle 4_0 and abt 3_0_0-alpha3`() {
+        doTest("4.0", "1.1.2-5", AndroidPluginParams("3.0.0-alpha3", "25.0.2", 25))
+    }
+
+    @Test
+    fun `test kotlin 1_1_2 and gradle 3_5 and abt 2_3_0`() {
+        doTest("3.5", "1.1.2", AndroidPluginParams("2.3.0", "25.0.0", 24))
+    }
+
+    @Test
+    fun `test kotlin 1_0_7 and gradle 2_14_1 and abt 2_2_3`() {
+        doTest("2.14.1", "1.0.7", AndroidPluginParams("2.2.3", "25.0.0", 24))
+    }
+
+    @Test
+    fun `test kotlin 1_2_20 and gradle 4_5 and abt 3_0_1`() {
+        doTest("4.5", "1.2.20", AndroidPluginParams("3.0.1", "27.0.0", 27))
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AndroidLibDependsOnJavaLibTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AndroidLibDependsOnJavaLibTest.kt
new file mode 100644
index 00000000..9bc52273
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AndroidLibDependsOnJavaLibTest.kt
@@ -0,0 +1,48 @@
+package org.jetbrains.dokka.gradle
+
+import org.gradle.testkit.runner.TaskOutcome
+import org.junit.Test
+import kotlin.test.assertEquals
+
+class AndroidLibDependsOnJavaLibTest: AbstractDokkaAndroidGradleTest() {
+
+    private val testDataRootPath = "androidLibDependsOnJavaLib"
+
+    private fun prepareTestData() {
+        val testDataRoot = testDataFolder.resolve(testDataRootPath)
+        val tmpRoot = testProjectDir.root.toPath()
+
+        testDataRoot.copy(tmpRoot)
+
+        androidLocalProperties?.copy(tmpRoot.resolve("local.properties"))
+    }
+
+
+    private fun doTest(gradleVersion: String, kotlinVersion: String, androidPluginParams: AbstractAndroidAppTest.AndroidPluginParams) {
+        prepareTestData()
+
+        val result = configure(gradleVersion, kotlinVersion,
+                arguments = arrayOf("dokka", "--stacktrace") + androidPluginParams.asArguments())
+                .build()
+
+        println(result.output)
+
+        assertEquals(TaskOutcome.SUCCESS, result.task(":lib:dokka")?.outcome)
+
+        val docsOutput = "lib/build/dokka"
+
+        checkOutputStructure("$testDataRootPath/fileTree.txt", docsOutput)
+
+        checkNoErrorClasses(docsOutput)
+        checkNoUnresolvedLinks(docsOutput)
+
+        checkExternalLink(docsOutput, "<span class=\"identifier\">LibClz</span>",
+                """<a href="https://example.com/example/jlib/LibClz.html"><span class="identifier">LibClz</span></a>""")
+    }
+
+
+    @Test
+    fun `test kotlin 1_2_20 and gradle 4_5 and abt 3_0_1`() {
+        doTest("4.5", "1.2.20", AbstractAndroidAppTest.AndroidPluginParams("3.0.1", "27.0.0", 27))
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AndroidMultiFlavourAppTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AndroidMultiFlavourAppTest.kt
new file mode 100644
index 00000000..ef1b94d8
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/AndroidMultiFlavourAppTest.kt
@@ -0,0 +1,60 @@
+package org.jetbrains.dokka.gradle
+
+import org.gradle.testkit.runner.TaskOutcome
+import org.jetbrains.dokka.gradle.AbstractAndroidAppTest.AndroidPluginParams
+import org.junit.Test
+import kotlin.test.assertEquals
+
+class AndroidMultiFlavourAppTest : AbstractDokkaAndroidGradleTest() {
+
+    fun prepareTestData(testDataRootPath: String) {
+        val testDataRoot = testDataFolder.resolve(testDataRootPath)
+        val tmpRoot = testProjectDir.root.toPath()
+
+        testDataRoot.resolve("app").copy(tmpRoot.resolve("app"))
+        testDataRoot.resolve("build.gradle").copy(tmpRoot.resolve("build.gradle"))
+        testDataRoot.resolve("settings.gradle").copy(tmpRoot.resolve("settings.gradle"))
+
+        androidLocalProperties?.copy(tmpRoot.resolve("local.properties"))
+    }
+
+    private fun doTest(gradleVersion: String, kotlinVersion: String, androidPluginParams: AndroidPluginParams) {
+        prepareTestData("androidMultiFlavourApp")
+
+        val result = configure(gradleVersion, kotlinVersion,
+                arguments = arrayOf("dokka", "dokkaFullFlavourOnly", "--stacktrace") + androidPluginParams.asArguments())
+                .build()
+
+        println(result.output)
+
+        assertEquals(TaskOutcome.SUCCESS, result.task(":app:dokka")?.outcome)
+        assertEquals(TaskOutcome.SUCCESS, result.task(":app:dokkaFullFlavourOnly")?.outcome)
+
+        val docsOutput = "app/build/dokka"
+
+        checkOutputStructure("androidMultiFlavourApp/fileTree.txt", docsOutput)
+
+        checkNoErrorClasses(docsOutput)
+        checkNoUnresolvedLinks(docsOutput)
+
+        checkExternalLink(docsOutput, "<span class=\"identifier\">Activity</span>",
+                """<a href="https://developer.android.com/reference/android/app/Activity.html"><span class="identifier">Activity</span></a>""")
+    }
+
+    @Test fun `test kotlin 1_1_2-5 and gradle 4_0 and abt 3_0_0-alpha3`() {
+        doTest("4.0", "1.1.2-5", AndroidPluginParams("3.0.0-alpha3", "25.0.2", 25))
+    }
+
+    @Test fun `test kotlin 1_1_2 and gradle 3_5 and abt 2_3_0`() {
+        doTest("3.5", "1.1.2", AndroidPluginParams("2.3.0", "25.0.0", 24))
+    }
+
+    @Test fun `test kotlin 1_0_7 and gradle 2_14_1 and abt 2_2_3`() {
+        doTest("2.14.1", "1.0.7", AndroidPluginParams("2.2.3", "25.0.0", 24))
+    }
+
+    @Test fun `test kotlin 1_2_20 and gradle 4_5 and abt 3_0_1`() {
+        doTest("4.5", "1.2.20", AndroidPluginParams("3.0.1", "27.0.0", 27))
+    }
+
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/BasicTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/BasicTest.kt
new file mode 100644
index 00000000..2e1a0d41
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/BasicTest.kt
@@ -0,0 +1,51 @@
+package org.jetbrains.dokka.gradle
+
+import org.gradle.testkit.runner.TaskOutcome
+import org.junit.Test
+import kotlin.test.assertEquals
+
+class BasicTest : AbstractDokkaGradleTest() {
+
+    fun prepareTestData(testDataRootPath: String) {
+        val testDataRoot = testDataFolder.resolve(testDataRootPath)
+        val tmpRoot = testProjectDir.root.toPath()
+
+        testDataRoot.resolve("src").copy(tmpRoot.resolve("src"))
+        testDataRoot.resolve("classDir").copy(tmpRoot.resolve("classDir"))
+        testDataRoot.resolve("build.gradle").copy(tmpRoot.resolve("build.gradle"))
+        testDataRoot.resolve("settings.gradle").copy(tmpRoot.resolve("settings.gradle"))
+    }
+
+    private fun doTest(gradleVersion: String, kotlinVersion: String) {
+
+        prepareTestData("basic")
+
+        val result = configure(gradleVersion, kotlinVersion, arguments = arrayOf("dokka", "--stacktrace")).build()
+
+        println(result.output)
+
+        assertEquals(TaskOutcome.SUCCESS, result.task(":dokka")?.outcome)
+
+        val docsOutput = "build/dokka"
+
+        checkOutputStructure("basic/fileTree.txt", docsOutput)
+
+        checkNoErrorClasses(docsOutput)
+        checkNoUnresolvedLinks(docsOutput)
+
+        checkExternalLink(docsOutput, "<span class=\"identifier\">String</span>",
+                """<a href="https://kotlinlang.org/api/latest/jvm/stdlib/kotlin/-string/index.html"><span class="identifier">String</span></a>""")
+    }
+
+    @Test fun `test kotlin 1_0_7 and gradle 2_14_1`() {
+        doTest("2.14.1", "1.0.7")
+    }
+
+    @Test fun `test kotlin 1_1_2 and gradle 4_0`() {
+        doTest("4.0", "1.1.2")
+    }
+
+    @Test fun `test kotlin 1_2_20 and gradle 4_5`() {
+        doTest("4.5", "1.2.20")
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/JavadocRSuppressionTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/JavadocRSuppressionTest.kt
new file mode 100644
index 00000000..3a4d08b8
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/JavadocRSuppressionTest.kt
@@ -0,0 +1,24 @@
+package org.jetbrains.dokka.gradle
+
+import org.junit.Test
+
+class JavadocRSuppressionTest : AbstractAndroidAppTest("androidAppJavadoc") {
+    @Test
+    fun `test kotlin 1_1_2-5 and gradle 4_0 and abt 3_0_0-alpha3`() {
+        doTest("4.0", "1.1.2-5", AndroidPluginParams("3.0.0-alpha3", "25.0.2", 25))
+    }
+
+    @Test
+    fun `test kotlin 1_1_2 and gradle 3_5 and abt 2_3_0`() {
+        doTest("3.5", "1.1.2", AndroidPluginParams("2.3.0", "25.0.0", 24))
+    }
+
+    @Test
+    fun `test kotlin 1_0_7 and gradle 2_14_1 and abt 2_2_3`() {
+        doTest("2.14.1", "1.0.7", AndroidPluginParams("2.2.3", "25.0.0", 24))
+    }
+
+    @Test fun `test kotlin 1_2_20 and gradle 4_5 and abt 3_0_1`() {
+        doTest("4.5", "1.2.20", AndroidPluginParams("3.0.1", "27.0.0", 27))
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/MultiProjectSingleOutTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/MultiProjectSingleOutTest.kt
new file mode 100644
index 00000000..9458528c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/MultiProjectSingleOutTest.kt
@@ -0,0 +1,57 @@
+package org.jetbrains.dokka.gradle
+
+import org.gradle.testkit.runner.TaskOutcome
+import org.junit.Test
+import kotlin.test.assertEquals
+
+class MultiProjectSingleOutTest : AbstractDokkaGradleTest() {
+
+    fun prepareTestData(testDataRootPath: String) {
+        val testDataRoot = testDataFolder.resolve(testDataRootPath)
+        val tmpRoot = testProjectDir.root.toPath()
+
+        testDataRoot.apply {
+            resolve("build.gradle").copy(tmpRoot.resolve("build.gradle"))
+            resolve("settings.gradle").copy(tmpRoot.resolve("settings.gradle"))
+            resolve("subA").copy(tmpRoot.resolve("subA"))
+            resolve("subB").copy(tmpRoot.resolve("subB"))
+        }
+    }
+
+    private fun doTest(gradleVersion: String, kotlinVersion: String) {
+
+        prepareTestData("multiProjectSingleOut")
+
+        val result = configure(gradleVersion, kotlinVersion, arguments = arrayOf("dokka", "--stacktrace")).build()
+
+        println(result.output)
+
+        assertEquals(TaskOutcome.SUCCESS, result.task(":dokka")?.outcome)
+
+        val docsOutput = "build/dokka"
+
+        checkOutputStructure("multiProjectSingleOut/fileTree.txt", docsOutput)
+
+        checkNoErrorClasses(docsOutput)
+        checkNoUnresolvedLinks(docsOutput)
+
+        checkExternalLink(docsOutput, "<span class=\"identifier\">String</span>",
+                """<a href="https://kotlinlang.org/api/latest/jvm/stdlib/kotlin/-string/index.html"><span class="identifier">String</span></a>""")
+    }
+
+    @Test fun `test kotlin 1_1_2 and gradle 3_5`() {
+        doTest("3.5", "1.1.2")
+    }
+
+    @Test fun `test kotlin 1_0_7 and gradle 2_14_1`() {
+        doTest("2.14.1", "1.0.7")
+    }
+
+    @Test fun `test kotlin 1_1_2 and gradle 4_0`() {
+        doTest("4.0", "1.1.2")
+    }
+
+    @Test fun `test kotlin 1_2_20 and gradle 4_5`() {
+        doTest("4.5", "1.2.20")
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/MultiplatformProjectTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/MultiplatformProjectTest.kt
new file mode 100644
index 00000000..3e61d79e
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/MultiplatformProjectTest.kt
@@ -0,0 +1,54 @@
+package org.jetbrains.dokka.gradle
+
+import org.gradle.testkit.runner.TaskOutcome
+import org.junit.Test
+import java.io.File
+import kotlin.test.assertEquals
+
+class MultiplatformProjectTest : AbstractDokkaGradleTest() {
+
+    fun prepareTestData(testDataRootPath: String) {
+        val testDataRoot = testDataFolder.resolve(testDataRootPath)
+        val tmpRoot = testProjectDir.root.toPath()
+
+        testDataRoot.apply {
+            resolve("build.gradle").copy(tmpRoot.resolve("build.gradle"))
+            resolve("settings.gradle").copy(tmpRoot.resolve("settings.gradle"))
+            resolve("src").copy(tmpRoot.resolve("src"))
+        }
+    }
+
+    private fun doTest(gradleVersion: String, kotlinVersion: String) {
+        val kotlinGradlePlugin = pluginClasspathData.resolveSibling("kotlin-gradle.txt").toFile().readLines().map { File(it) }
+        prepareTestData("multiplatformProject")
+
+        // Remove withDebug(false) when https://github.com/gradle/gradle/issues/6862 is solved
+        val result = configure(gradleVersion, kotlinVersion, arguments = arrayOf("dokka", "--stacktrace"))
+            .withDebug(false)
+            .withPluginClasspath(pluginClasspath.union(kotlinGradlePlugin))
+            .build()
+
+        println(result.output)
+
+        assertEquals(TaskOutcome.SUCCESS, result.task(":dokka")?.outcome)
+
+        val docsOutput = "build/dokka"
+
+        checkOutputStructure("multiplatformProject/fileTree.txt", docsOutput)
+
+        checkNoErrorClasses(docsOutput)
+        checkNoUnresolvedLinks(docsOutput)
+    }
+
+    @Test fun `test kotlin 1_3_30 and gradle 4_7`() {
+        doTest("4.7", "1.3.30")
+    }
+
+    @Test fun `test kotlin 1_3_40 and gradle 4_10_3`() {
+        doTest("4.10.3", "1.3.40")
+    }
+
+    @Test fun `test kotlin 1_3_40 and gradle 5_6_1`() {
+        doTest("5.6.1", "1.3.50")
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/RebuildAfterSourceChangeTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/RebuildAfterSourceChangeTest.kt
new file mode 100644
index 00000000..8b2db560
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/RebuildAfterSourceChangeTest.kt
@@ -0,0 +1,74 @@
+package org.jetbrains.dokka.gradle
+
+import org.gradle.testkit.runner.TaskOutcome
+import org.junit.Test
+import java.nio.file.Path
+import kotlin.test.assertEquals
+
+class RebuildAfterSourceChangeTest : AbstractDokkaGradleTest() {
+
+    fun prepareTestData(testDataRootPath: String): Pair<Path, Path> {
+        val testDataRoot = testDataFolder.resolve(testDataRootPath)
+        val tmpRoot = testProjectDir.root.toPath()
+
+        testDataRoot.resolve("src").copy(tmpRoot.resolve("src"))
+        testDataRoot.resolve("build.gradle").copy(tmpRoot.resolve("build.gradle"))
+        testDataRoot.resolve("settings.gradle").copy(tmpRoot.resolve("settings.gradle"))
+
+        return testDataRoot to tmpRoot
+    }
+
+    private fun doTest(gradleVersion: String, kotlinVersion: String) {
+
+        val (testDataRoot, tmpRoot) = prepareTestData("sourcesChange")
+        val docsOutput = "build/dokka"
+
+        configure(gradleVersion, kotlinVersion, arguments = arrayOf("dokka", "--stacktrace")).build().let { result ->
+            println(result.output)
+
+            assertEquals(TaskOutcome.SUCCESS, result.task(":dokka")?.outcome)
+        }
+
+
+        configure(gradleVersion, kotlinVersion, arguments = arrayOf("dokka", "-i", "--stacktrace")).build().let { result ->
+            println(result.output)
+
+            assertEquals(TaskOutcome.UP_TO_DATE, result.task(":dokka")?.outcome)
+        }
+
+        checkOutputStructure("sourcesChange/fileTree.txt", docsOutput)
+
+        testDataRoot.resolve("src1").copy(tmpRoot.resolve("src"))
+
+        configure(gradleVersion, kotlinVersion, arguments = arrayOf("dokka", "--stacktrace")).build().let { result ->
+            println(result.output)
+
+            assertEquals(TaskOutcome.SUCCESS, result.task(":dokka")?.outcome)
+        }
+
+
+        checkOutputStructure("sourcesChange/fileTree1.txt", docsOutput)
+
+    }
+
+
+    @Test
+    fun `test kotlin 1_0_7 and gradle 2_14_1`() {
+        doTest("2.14.1", "1.0.7")
+    }
+
+    @Test
+    fun `test kotlin 1_1_2 and gradle 3_5`() {
+        doTest("3.5", "1.1.2")
+    }
+
+    @Test
+    fun `test kotlin 1_1_2 and gradle 4_0`() {
+        doTest("4.0", "1.1.2")
+    }
+
+    @Test
+    fun `test kotlin 1_2_20 and gradle 4_5`() {
+        doTest("4.5", "1.2.20")
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/TypeSafeConfigurationTest.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/TypeSafeConfigurationTest.kt
new file mode 100644
index 00000000..7b179e92
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/TypeSafeConfigurationTest.kt
@@ -0,0 +1,36 @@
+package org.jetbrains.dokka.gradle
+
+import org.junit.Test
+import org.junit.runner.RunWith
+import org.junit.runners.Parameterized
+
+@RunWith(Parameterized::class)
+class TypeSafeConfigurationTest(private val testCase: TestCase) : AbstractDokkaGradleTest() {
+
+    data class TestCase(val gradleVersion: String, val kotlinVersion: String) {
+        override fun toString(): String = "Gradle $gradleVersion and Kotlin $kotlinVersion"
+    }
+
+    companion object {
+        @Parameterized.Parameters(name = "{0}")
+        @JvmStatic
+        fun testCases() = listOf(
+                TestCase("4.0", "1.1.2"),
+                TestCase("4.5", "1.2.20"),
+                TestCase("4.10.1", "1.2.60")
+        )
+    }
+
+    @Test
+    fun test() {
+
+        testDataFolder.resolve("typeSafeConfiguration").toFile()
+                .copyRecursively(testProjectDir.root)
+
+        configure(
+                testCase.gradleVersion,
+                testCase.kotlinVersion,
+                arguments = arrayOf("help", "-s")
+        ).build()
+    }
+}
diff --git a/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/Utils.kt b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/Utils.kt
new file mode 100644
index 00000000..6f17af22
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/src/test/kotlin/org/jetbrains/dokka/gradle/Utils.kt
@@ -0,0 +1,56 @@
+package org.jetbrains.dokka.gradle
+
+import com.intellij.rt.execution.junit.FileComparisonFailure
+import java.io.File
+import java.io.IOException
+import java.nio.file.*
+import java.nio.file.attribute.BasicFileAttributes
+
+
+fun File.writeStructure(builder: StringBuilder, relativeTo: File = this, spaces: Int = 0) {
+    builder.append(" ".repeat(spaces))
+    val out = if (this != relativeTo) this.relativeTo(relativeTo) else this
+
+    builder.append(out)
+    if (this.isDirectory) {
+        builder.appendln("/")
+        this.listFiles().sortedBy { it.name }.forEach { it.writeStructure(builder, this, spaces + 4) }
+    } else {
+        builder.appendln()
+    }
+}
+
+fun assertEqualsIgnoringSeparators(expectedFile: File, output: String) {
+    if (!expectedFile.exists()) expectedFile.createNewFile()
+    val expectedText = expectedFile.readText().replace("\r\n", "\n")
+    val actualText = output.replace("\r\n", "\n")
+
+    if (expectedText != actualText)
+        throw FileComparisonFailure("", expectedText, actualText, expectedFile.canonicalPath)
+}
+
+class CopyFileVisitor(private var sourcePath: Path?, private val targetPath: Path) : SimpleFileVisitor<Path>() {
+
+    @Throws(IOException::class)
+    override fun preVisitDirectory(dir: Path,
+                                   attrs: BasicFileAttributes): FileVisitResult {
+        if (sourcePath == null) {
+            sourcePath = dir
+        } else {
+            Files.createDirectories(targetPath.resolve(sourcePath?.relativize(dir)))
+        }
+        return FileVisitResult.CONTINUE
+    }
+
+    @Throws(IOException::class)
+    override fun visitFile(file: Path,
+                           attrs: BasicFileAttributes): FileVisitResult {
+        Files.copy(file, targetPath.resolve(sourcePath?.relativize(file)), StandardCopyOption.REPLACE_EXISTING)
+        return FileVisitResult.CONTINUE
+    }
+}
+
+fun Path.copy(to: Path) {
+    Files.walkFileTree(this, CopyFileVisitor(this, to))
+}
+
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/build.gradle b/integration-tests/gradle-integration-tests/testData/androidApp/app/build.gradle
new file mode 100644
index 00000000..2420107c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/build.gradle
@@ -0,0 +1,45 @@
+buildscript {
+    repositories {
+        jcenter()
+        mavenLocal()
+    }
+    dependencies {
+        classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$test_kotlin_version"
+    }
+}
+
+plugins {
+    id 'org.jetbrains.dokka'
+}
+
+
+apply plugin: 'com.android.application'
+apply plugin: 'kotlin-android'
+apply plugin: 'kotlin-android-extensions'
+
+android {
+    compileSdkVersion Integer.parseInt(sdk_version)
+    buildToolsVersion abt_version
+
+    defaultConfig {
+        applicationId "org.example.kotlin.mixed"
+        minSdkVersion 14
+        targetSdkVersion Integer.parseInt(sdk_version)
+        versionCode 1
+        versionName "1.0"
+    }
+    buildTypes {
+        release {
+            minifyEnabled false
+            proguardFiles getDefaultProguardFile('proguard-android.txt')
+        }
+    }
+    sourceSets {
+        main.java.srcDirs += 'src/main/kotlin'
+    }
+}
+
+dependencies {
+    compile "org.jetbrains.kotlin:kotlin-stdlib:$test_kotlin_version"
+    dokkaRuntime files(dokka_fatjar)
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/AndroidManifest.xml b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/AndroidManifest.xml
new file mode 100644
index 00000000..b4e1a892
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/AndroidManifest.xml
@@ -0,0 +1,26 @@
+<?xml version="1.0" encoding="utf-8"?>
+<manifest xmlns:android="http://schemas.android.com/apk/res/android"
+    package="org.example.kotlin.mixed" >
+
+    <application
+        android:allowBackup="true"
+        android:icon="@drawable/ic_launcher"
+        android:label="@string/app_name"
+        android:theme="@style/AppTheme" >
+
+        <activity
+            android:name=".JavaActivity"
+            android:label="@string/title_activity_main_activity1" >
+            <intent-filter>
+                <action android:name="android.intent.action.MAIN" />
+                <category android:name="android.intent.category.LAUNCHER" />
+            </intent-filter>
+        </activity>
+
+        <activity
+            android:name=".KotlinActivity"
+            android:label="@string/title_activity_main_activity2" />
+
+    </application>
+
+</manifest>
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/java/org/example/kotlin/mixed/JavaActivity.java b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/java/org/example/kotlin/mixed/JavaActivity.java
new file mode 100644
index 00000000..3668c594
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/java/org/example/kotlin/mixed/JavaActivity.java
@@ -0,0 +1,34 @@
+package org.example.kotlin.mixed;
+
+import android.content.Intent;
+import android.os.Bundle;
+import android.app.Activity;
+import android.view.Menu;
+import android.view.View;
+import android.widget.Button;
+
+public class JavaActivity extends Activity {
+
+    @Override
+    protected void onCreate(Bundle savedInstanceState) {
+        super.onCreate(savedInstanceState);
+        setContentView(R.layout.activity_main);
+
+        Button next = (Button) findViewById(R.id.Button01);
+        next.setOnClickListener(new View.OnClickListener() {
+            public void onClick(View view) {
+                Intent myIntent = new Intent(view.getContext(), KotlinActivity.class);
+                startActivityForResult(myIntent, 0);
+            }
+        });
+    }
+
+
+    @Override
+    public boolean onCreateOptionsMenu(Menu menu) {
+        // Inflate the menu; this adds items to the action bar if it is present.
+        getMenuInflater().inflate(R.menu.main, menu);
+        return true;
+    }
+    
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/kotlin/org/example/kotlin/mixed/KotlinActivity.kt b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/kotlin/org/example/kotlin/mixed/KotlinActivity.kt
new file mode 100644
index 00000000..ca2f27b0
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/kotlin/org/example/kotlin/mixed/KotlinActivity.kt
@@ -0,0 +1,28 @@
+package org.example.kotlin.mixed
+
+import android.content.Intent
+import android.os.Bundle
+import android.app.Activity
+import android.view.Menu
+import android.widget.Button
+
+class KotlinActivity : Activity() {
+
+    override fun onCreate(savedInstanceState: Bundle?) {
+        super.onCreate(savedInstanceState)
+        setContentView(R.layout.activity_main2)
+
+        val next = findViewById(R.id.Button02) as Button
+        next.setOnClickListener {
+            val intent: Intent = Intent()
+            setResult(RESULT_OK, intent)
+            finish()
+        }
+    }
+
+    override fun onCreateOptionsMenu(menu: Menu?): Boolean {
+        // Inflate the menu; this adds items to the action bar if it is present.
+        menuInflater.inflate(R.menu.main_activity2, menu)
+        return true
+    }
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/drawable-hdpi/ic_launcher.png b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/drawable-hdpi/ic_launcher.png
new file mode 100644
index 00000000..96a442e5
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/drawable-hdpi/ic_launcher.png
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/drawable-mdpi/ic_launcher.png b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/drawable-mdpi/ic_launcher.png
new file mode 100644
index 00000000..359047df
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/drawable-mdpi/ic_launcher.png
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/drawable-xhdpi/ic_launcher.png b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/drawable-xhdpi/ic_launcher.png
new file mode 100644
index 00000000..71c6d760
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/drawable-xhdpi/ic_launcher.png
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/layout/activity_main.xml b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/layout/activity_main.xml
new file mode 100644
index 00000000..ede57c39
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/layout/activity_main.xml
@@ -0,0 +1,24 @@
+<LinearLayout xmlns:android="http://schemas.android.com/apk/res/android"
+    xmlns:tools="http://schemas.android.com/tools"
+    android:orientation="vertical"
+    android:layout_width="match_parent"
+    android:layout_height="match_parent"
+    android:paddingLeft="@dimen/activity_horizontal_margin"
+    android:paddingRight="@dimen/activity_horizontal_margin"
+    android:paddingTop="@dimen/activity_vertical_margin"
+    android:paddingBottom="@dimen/activity_vertical_margin"
+    tools:context=".MainActivity">
+
+    <TextView
+        android:layout_width="fill_parent"
+        android:layout_height="wrap_content"
+        android:text="Activity 1" />
+
+    <Button android:text="Next"
+            android:id="@+id/Button01"
+            android:layout_width="250px"
+            android:textSize="18px"
+            android:layout_height="55px">
+    </Button>
+
+</LinearLayout>
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/layout/activity_main2.xml b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/layout/activity_main2.xml
new file mode 100644
index 00000000..d707536a
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/layout/activity_main2.xml
@@ -0,0 +1,24 @@
+<LinearLayout xmlns:android="http://schemas.android.com/apk/res/android"
+              xmlns:tools="http://schemas.android.com/tools"
+              android:orientation="vertical"
+              android:layout_width="match_parent"
+              android:layout_height="match_parent"
+              android:paddingLeft="@dimen/activity_horizontal_margin"
+              android:paddingRight="@dimen/activity_horizontal_margin"
+              android:paddingTop="@dimen/activity_vertical_margin"
+              android:paddingBottom="@dimen/activity_vertical_margin"
+              tools:context=".MainActivity">
+
+    <TextView
+            android:layout_width="fill_parent"
+            android:layout_height="wrap_content"
+            android:text="Activity 2" />
+
+    <Button android:text="Next"
+            android:id="@+id/Button02"
+            android:layout_width="250px"
+            android:textSize="18px"
+            android:layout_height="55px">
+    </Button>
+
+</LinearLayout>
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/menu/main.xml b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/menu/main.xml
new file mode 100644
index 00000000..f3b10b6c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/menu/main.xml
@@ -0,0 +1,6 @@
+<menu xmlns:android="http://schemas.android.com/apk/res/android">
+    <item android:id="@+id/action_settings"
+        android:title="@string/action_settings"
+        android:orderInCategory="100"
+        android:showAsAction="never" />
+</menu>
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/menu/main_activity2.xml b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/menu/main_activity2.xml
new file mode 100644
index 00000000..f3b10b6c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/menu/main_activity2.xml
@@ -0,0 +1,6 @@
+<menu xmlns:android="http://schemas.android.com/apk/res/android">
+    <item android:id="@+id/action_settings"
+        android:title="@string/action_settings"
+        android:orderInCategory="100"
+        android:showAsAction="never" />
+</menu>
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/values/dimens.xml b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/values/dimens.xml
new file mode 100644
index 00000000..47c82246
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/values/dimens.xml
@@ -0,0 +1,5 @@
+<resources>
+    <!-- Default screen margins, per the Android Design guidelines. -->
+    <dimen name="activity_horizontal_margin">16dp</dimen>
+    <dimen name="activity_vertical_margin">16dp</dimen>
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/values/strings.xml b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/values/strings.xml
new file mode 100644
index 00000000..d8f08bc2
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/values/strings.xml
@@ -0,0 +1,10 @@
+<?xml version="1.0" encoding="utf-8"?>
+<resources>
+
+    <string name="app_name">AndroidSample</string>
+    <string name="action_settings">Settings</string>
+    <string name="hello_world">Hello world!</string>
+    <string name="title_activity_main_activity1">JavaActivity</string>
+    <string name="title_activity_main_activity2">KotlinActivity</string>
+
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/values/styles.xml b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/values/styles.xml
new file mode 100644
index 00000000..6ce89c7b
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/app/src/main/res/values/styles.xml
@@ -0,0 +1,20 @@
+<resources>
+
+    <!--
+        Base application theme, dependent on API level. This theme is replaced
+        by AppBaseTheme from res/values-vXX/styles.xml on newer devices.
+    -->
+    <style name="AppBaseTheme" parent="android:Theme.Light">
+        <!--
+            Theme customizations available in newer API levels can go in
+            res/values-vXX/styles.xml, while customizations related to
+            backward-compatibility can go here.
+        -->
+    </style>
+
+    <!-- Application theme. -->
+    <style name="AppTheme" parent="AppBaseTheme">
+        <!-- All customizations that are NOT specific to a particular API-level can go here. -->
+    </style>
+
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/build.gradle b/integration-tests/gradle-integration-tests/testData/androidApp/build.gradle
new file mode 100644
index 00000000..35356b90
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/build.gradle
@@ -0,0 +1,21 @@
+buildscript {
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url 'https://maven.google.com' }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+    dependencies {
+        classpath "com.android.tools.build:gradle:$abt_plugin_version"
+    }
+}
+
+allprojects {
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/fileTree.txt b/integration-tests/gradle-integration-tests/testData/androidApp/fileTree.txt
new file mode 100644
index 00000000..f66c79e3
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/fileTree.txt
@@ -0,0 +1,20 @@
+/
+    app/
+        alltypes/
+            index.html
+        index-outline.html
+        index.html
+        org.example.kotlin.mixed/
+            -java-activity/
+                -init-.html
+                index.html
+                on-create-options-menu.html
+                on-create.html
+            -kotlin-activity/
+                -init-.html
+                index.html
+                on-create-options-menu.html
+                on-create.html
+            index.html
+        package-list
+    style.css
diff --git a/integration-tests/gradle-integration-tests/testData/androidApp/settings.gradle b/integration-tests/gradle-integration-tests/testData/androidApp/settings.gradle
new file mode 100644
index 00000000..1feb2867
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidApp/settings.gradle
@@ -0,0 +1,3 @@
+rootProject.name = "androidApp"
+
+include ':app'
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/build.gradle b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/build.gradle
new file mode 100644
index 00000000..66421f52
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/build.gradle
@@ -0,0 +1,49 @@
+buildscript {
+    repositories {
+        jcenter()
+        mavenLocal()
+    }
+    dependencies {
+        classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$test_kotlin_version"
+    }
+}
+
+plugins {
+    id 'org.jetbrains.dokka'
+}
+
+
+apply plugin: 'com.android.application'
+apply plugin: 'kotlin-android'
+
+android {
+    compileSdkVersion Integer.parseInt(sdk_version)
+    buildToolsVersion abt_version
+
+    defaultConfig {
+        applicationId "org.example.kotlin.mixed"
+        minSdkVersion 14
+        targetSdkVersion Integer.parseInt(sdk_version)
+        versionCode 1
+        versionName "1.0"
+    }
+    buildTypes {
+        release {
+            minifyEnabled false
+            proguardFiles getDefaultProguardFile('proguard-android.txt')
+        }
+    }
+    sourceSets {
+        main.java.srcDirs += 'src/main/kotlin'
+    }
+}
+
+dependencies {
+    compile "org.jetbrains.kotlin:kotlin-stdlib:$test_kotlin_version"
+    dokkaRuntime files(dokka_fatjar)
+}
+
+
+dokka {
+    outputFormat = "javadoc"
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/AndroidManifest.xml b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/AndroidManifest.xml
new file mode 100644
index 00000000..b4e1a892
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/AndroidManifest.xml
@@ -0,0 +1,26 @@
+<?xml version="1.0" encoding="utf-8"?>
+<manifest xmlns:android="http://schemas.android.com/apk/res/android"
+    package="org.example.kotlin.mixed" >
+
+    <application
+        android:allowBackup="true"
+        android:icon="@drawable/ic_launcher"
+        android:label="@string/app_name"
+        android:theme="@style/AppTheme" >
+
+        <activity
+            android:name=".JavaActivity"
+            android:label="@string/title_activity_main_activity1" >
+            <intent-filter>
+                <action android:name="android.intent.action.MAIN" />
+                <category android:name="android.intent.category.LAUNCHER" />
+            </intent-filter>
+        </activity>
+
+        <activity
+            android:name=".KotlinActivity"
+            android:label="@string/title_activity_main_activity2" />
+
+    </application>
+
+</manifest>
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/java/org/example/kotlin/mixed/JavaActivity.java b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/java/org/example/kotlin/mixed/JavaActivity.java
new file mode 100644
index 00000000..3668c594
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/java/org/example/kotlin/mixed/JavaActivity.java
@@ -0,0 +1,34 @@
+package org.example.kotlin.mixed;
+
+import android.content.Intent;
+import android.os.Bundle;
+import android.app.Activity;
+import android.view.Menu;
+import android.view.View;
+import android.widget.Button;
+
+public class JavaActivity extends Activity {
+
+    @Override
+    protected void onCreate(Bundle savedInstanceState) {
+        super.onCreate(savedInstanceState);
+        setContentView(R.layout.activity_main);
+
+        Button next = (Button) findViewById(R.id.Button01);
+        next.setOnClickListener(new View.OnClickListener() {
+            public void onClick(View view) {
+                Intent myIntent = new Intent(view.getContext(), KotlinActivity.class);
+                startActivityForResult(myIntent, 0);
+            }
+        });
+    }
+
+
+    @Override
+    public boolean onCreateOptionsMenu(Menu menu) {
+        // Inflate the menu; this adds items to the action bar if it is present.
+        getMenuInflater().inflate(R.menu.main, menu);
+        return true;
+    }
+    
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/kotlin/org/example/kotlin/mixed/KotlinActivity.kt b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/kotlin/org/example/kotlin/mixed/KotlinActivity.kt
new file mode 100644
index 00000000..ca2f27b0
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/kotlin/org/example/kotlin/mixed/KotlinActivity.kt
@@ -0,0 +1,28 @@
+package org.example.kotlin.mixed
+
+import android.content.Intent
+import android.os.Bundle
+import android.app.Activity
+import android.view.Menu
+import android.widget.Button
+
+class KotlinActivity : Activity() {
+
+    override fun onCreate(savedInstanceState: Bundle?) {
+        super.onCreate(savedInstanceState)
+        setContentView(R.layout.activity_main2)
+
+        val next = findViewById(R.id.Button02) as Button
+        next.setOnClickListener {
+            val intent: Intent = Intent()
+            setResult(RESULT_OK, intent)
+            finish()
+        }
+    }
+
+    override fun onCreateOptionsMenu(menu: Menu?): Boolean {
+        // Inflate the menu; this adds items to the action bar if it is present.
+        menuInflater.inflate(R.menu.main_activity2, menu)
+        return true
+    }
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/drawable-hdpi/ic_launcher.png b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/drawable-hdpi/ic_launcher.png
new file mode 100644
index 00000000..96a442e5
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/drawable-hdpi/ic_launcher.png
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/drawable-mdpi/ic_launcher.png b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/drawable-mdpi/ic_launcher.png
new file mode 100644
index 00000000..359047df
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/drawable-mdpi/ic_launcher.png
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/drawable-xhdpi/ic_launcher.png b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/drawable-xhdpi/ic_launcher.png
new file mode 100644
index 00000000..71c6d760
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/drawable-xhdpi/ic_launcher.png
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/layout/activity_main.xml b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/layout/activity_main.xml
new file mode 100644
index 00000000..ede57c39
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/layout/activity_main.xml
@@ -0,0 +1,24 @@
+<LinearLayout xmlns:android="http://schemas.android.com/apk/res/android"
+    xmlns:tools="http://schemas.android.com/tools"
+    android:orientation="vertical"
+    android:layout_width="match_parent"
+    android:layout_height="match_parent"
+    android:paddingLeft="@dimen/activity_horizontal_margin"
+    android:paddingRight="@dimen/activity_horizontal_margin"
+    android:paddingTop="@dimen/activity_vertical_margin"
+    android:paddingBottom="@dimen/activity_vertical_margin"
+    tools:context=".MainActivity">
+
+    <TextView
+        android:layout_width="fill_parent"
+        android:layout_height="wrap_content"
+        android:text="Activity 1" />
+
+    <Button android:text="Next"
+            android:id="@+id/Button01"
+            android:layout_width="250px"
+            android:textSize="18px"
+            android:layout_height="55px">
+    </Button>
+
+</LinearLayout>
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/layout/activity_main2.xml b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/layout/activity_main2.xml
new file mode 100644
index 00000000..d707536a
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/layout/activity_main2.xml
@@ -0,0 +1,24 @@
+<LinearLayout xmlns:android="http://schemas.android.com/apk/res/android"
+              xmlns:tools="http://schemas.android.com/tools"
+              android:orientation="vertical"
+              android:layout_width="match_parent"
+              android:layout_height="match_parent"
+              android:paddingLeft="@dimen/activity_horizontal_margin"
+              android:paddingRight="@dimen/activity_horizontal_margin"
+              android:paddingTop="@dimen/activity_vertical_margin"
+              android:paddingBottom="@dimen/activity_vertical_margin"
+              tools:context=".MainActivity">
+
+    <TextView
+            android:layout_width="fill_parent"
+            android:layout_height="wrap_content"
+            android:text="Activity 2" />
+
+    <Button android:text="Next"
+            android:id="@+id/Button02"
+            android:layout_width="250px"
+            android:textSize="18px"
+            android:layout_height="55px">
+    </Button>
+
+</LinearLayout>
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/menu/main.xml b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/menu/main.xml
new file mode 100644
index 00000000..f3b10b6c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/menu/main.xml
@@ -0,0 +1,6 @@
+<menu xmlns:android="http://schemas.android.com/apk/res/android">
+    <item android:id="@+id/action_settings"
+        android:title="@string/action_settings"
+        android:orderInCategory="100"
+        android:showAsAction="never" />
+</menu>
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/menu/main_activity2.xml b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/menu/main_activity2.xml
new file mode 100644
index 00000000..f3b10b6c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/menu/main_activity2.xml
@@ -0,0 +1,6 @@
+<menu xmlns:android="http://schemas.android.com/apk/res/android">
+    <item android:id="@+id/action_settings"
+        android:title="@string/action_settings"
+        android:orderInCategory="100"
+        android:showAsAction="never" />
+</menu>
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/values/dimens.xml b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/values/dimens.xml
new file mode 100644
index 00000000..47c82246
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/values/dimens.xml
@@ -0,0 +1,5 @@
+<resources>
+    <!-- Default screen margins, per the Android Design guidelines. -->
+    <dimen name="activity_horizontal_margin">16dp</dimen>
+    <dimen name="activity_vertical_margin">16dp</dimen>
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/values/strings.xml b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/values/strings.xml
new file mode 100644
index 00000000..d8f08bc2
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/values/strings.xml
@@ -0,0 +1,10 @@
+<?xml version="1.0" encoding="utf-8"?>
+<resources>
+
+    <string name="app_name">AndroidSample</string>
+    <string name="action_settings">Settings</string>
+    <string name="hello_world">Hello world!</string>
+    <string name="title_activity_main_activity1">JavaActivity</string>
+    <string name="title_activity_main_activity2">KotlinActivity</string>
+
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/values/styles.xml b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/values/styles.xml
new file mode 100644
index 00000000..6ce89c7b
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/app/src/main/res/values/styles.xml
@@ -0,0 +1,20 @@
+<resources>
+
+    <!--
+        Base application theme, dependent on API level. This theme is replaced
+        by AppBaseTheme from res/values-vXX/styles.xml on newer devices.
+    -->
+    <style name="AppBaseTheme" parent="android:Theme.Light">
+        <!--
+            Theme customizations available in newer API levels can go in
+            res/values-vXX/styles.xml, while customizations related to
+            backward-compatibility can go here.
+        -->
+    </style>
+
+    <!-- Application theme. -->
+    <style name="AppTheme" parent="AppBaseTheme">
+        <!-- All customizations that are NOT specific to a particular API-level can go here. -->
+    </style>
+
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/build.gradle b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/build.gradle
new file mode 100644
index 00000000..35356b90
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/build.gradle
@@ -0,0 +1,21 @@
+buildscript {
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url 'https://maven.google.com' }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+    dependencies {
+        classpath "com.android.tools.build:gradle:$abt_plugin_version"
+    }
+}
+
+allprojects {
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/fileTree.txt b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/fileTree.txt
new file mode 100644
index 00000000..c5e79eba
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/fileTree.txt
@@ -0,0 +1,21 @@
+/
+    allclasses-frame.html
+    allclasses-noframe.html
+    constant-values.html
+    deprecated-list.html
+    help-doc.html
+    index-all.html
+    index.html
+    org/
+        example/
+            kotlin/
+                mixed/
+                    JavaActivity.html
+                    KotlinActivity.html
+                    package-frame.html
+                    package-summary.html
+                    package-tree.html
+    overview-tree.html
+    package-list
+    script.js
+    stylesheet.css
diff --git a/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/settings.gradle b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/settings.gradle
new file mode 100644
index 00000000..a4e67fea
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidAppJavadoc/settings.gradle
@@ -0,0 +1,3 @@
+rootProject.name = "androidAppJavadoc"
+
+include ':app'
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/build.gradle b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/build.gradle
new file mode 100644
index 00000000..736668ab
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/build.gradle
@@ -0,0 +1,20 @@
+subprojects {
+    buildscript {
+        repositories {
+            mavenCentral()
+            jcenter()
+            maven { url 'https://maven.google.com' }
+            maven { url "https://dl.bintray.com/kotlin/kotlin-eap/" }
+            maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+        }
+
+    }
+
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url 'https://maven.google.com' }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap/" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/fileTree.txt b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/fileTree.txt
new file mode 100644
index 00000000..6c96a01c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/fileTree.txt
@@ -0,0 +1,14 @@
+/
+    lib/
+        alltypes/
+            index.html
+        example/
+            -lib-clz-use/
+                -init-.html
+                f.html
+                index.html
+            index.html
+        index-outline.html
+        index.html
+        package-list
+    style.css
diff --git a/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/jlib/build.gradle b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/jlib/build.gradle
new file mode 100644
index 00000000..bbfeb03c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/jlib/build.gradle
@@ -0,0 +1 @@
+apply plugin: 'java'
diff --git a/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/jlib/src/main/java/example/jlib/LibClz.java b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/jlib/src/main/java/example/jlib/LibClz.java
new file mode 100644
index 00000000..1d9a6fb2
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/jlib/src/main/java/example/jlib/LibClz.java
@@ -0,0 +1,5 @@
+package example.jlib;
+
+public class LibClz {
+
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/lib/build.gradle b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/lib/build.gradle
new file mode 100644
index 00000000..b1ee52ab
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/lib/build.gradle
@@ -0,0 +1,39 @@
+buildscript {
+    dependencies {
+        classpath "com.android.tools.build:gradle:$abt_plugin_version"
+        classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$test_kotlin_version"
+    }
+}
+
+
+plugins {
+    id 'org.jetbrains.dokka'
+}
+
+
+apply plugin: 'com.android.library'
+apply plugin: 'kotlin-android'
+
+
+android {
+    compileSdkVersion Integer.parseInt(sdk_version)
+    buildToolsVersion abt_version
+
+    sourceSets {
+        main.java.srcDirs += 'src/main/kotlin'
+    }
+}
+
+dependencies {
+    api(project(":jlib"))
+    dokkaRuntime files(dokka_fatjar)
+}
+
+dokka {
+    configuration {
+        externalDocumentationLink {
+            url = new URL("https://example.com")
+            packageListUrl = file("$rootDir/package-list").toURI().toURL()
+        }
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/lib/src/main/AndroidManifest.xml b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/lib/src/main/AndroidManifest.xml
new file mode 100644
index 00000000..267f6efd
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/lib/src/main/AndroidManifest.xml
@@ -0,0 +1,4 @@
+<?xml version="1.0" encoding="utf-8"?>
+<manifest xmlns:android="http://schemas.android.com/apk/res/android"
+          package="example">
+</manifest>
diff --git a/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/lib/src/main/kotlin/example/LibClzUse.kt b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/lib/src/main/kotlin/example/LibClzUse.kt
new file mode 100644
index 00000000..d034a3a9
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/lib/src/main/kotlin/example/LibClzUse.kt
@@ -0,0 +1,13 @@
+package example
+
+import example.jlib.LibClz
+
+/**
+ * Uses jlib
+ */
+class LibClzUse {
+    /**
+     * Returns LibClz
+     */
+    fun f(): LibClz = LibClz()
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/package-list b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/package-list
new file mode 100644
index 00000000..bf76058e
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/package-list
@@ -0,0 +1 @@
+example.jlib
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/settings.gradle b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/settings.gradle
new file mode 100644
index 00000000..5b4250a0
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidLibDependsOnJavaLib/settings.gradle
@@ -0,0 +1,5 @@
+rootProject.name = "androidLibDependsOnJavaLib"
+
+
+include(":lib")
+include(":jlib")
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/build.gradle b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/build.gradle
new file mode 100644
index 00000000..660257ab
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/build.gradle
@@ -0,0 +1,75 @@
+buildscript {
+    repositories {
+        jcenter()
+        mavenLocal()
+    }
+    dependencies {
+        classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$test_kotlin_version"
+    }
+}
+
+plugins {
+    id 'org.jetbrains.dokka'
+}
+
+
+apply plugin: 'com.android.application'
+apply plugin: 'kotlin-android'
+apply plugin: 'kotlin-android-extensions'
+
+android {
+    compileSdkVersion Integer.parseInt(sdk_version)
+    buildToolsVersion abt_version
+
+    defaultConfig {
+        applicationId "org.example.kotlin.mixed"
+        minSdkVersion 14
+        targetSdkVersion Integer.parseInt(sdk_version)
+        versionCode 1
+        versionName "1.0"
+    }
+    buildTypes {
+        release {
+            minifyEnabled false
+            proguardFiles getDefaultProguardFile('proguard-android.txt')
+        }
+    }
+
+    flavorDimensions "mode"
+    productFlavors {
+        free {
+            dimension "mode"
+            applicationIdSuffix ".free"
+            versionNameSuffix "-free"
+        }
+        full {
+            dimension "mode"
+            applicationIdSuffix ".full"
+            versionNameSuffix "-full"
+        }
+    }
+    sourceSets {
+        main.java.srcDirs += 'src/main/kotlin'
+        free.java.srcDirs += 'src/free/kotlin'
+    }
+}
+
+dependencies {
+    compile "org.jetbrains.kotlin:kotlin-stdlib:$test_kotlin_version"
+    dokkaRuntime files(dokka_fatjar)
+}
+
+
+dokka {
+    outputDirectory = "$buildDir/dokka/all"
+}
+
+task dokkaFullFlavourOnly(type: org.jetbrains.dokka.gradle.DokkaTask) {
+    outputDirectory = "$buildDir/dokka/fullOnly"
+    configuration {
+        moduleName = "full"
+        kotlinTasks {
+            ["compileFullReleaseKotlin"]
+        }
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/AndroidManifest.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/AndroidManifest.xml
new file mode 100644
index 00000000..3ecbcd3a
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/AndroidManifest.xml
@@ -0,0 +1,9 @@
+<manifest xmlns:android="http://schemas.android.com/apk/res/android">
+
+    <application>
+        <activity
+            android:name="org.example.kotlin.mixed.free.AdActivity"
+            android:label="@string/title_activity_ad"
+            android:theme="@style/AppTheme"></activity>
+    </application>
+</manifest>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/kotlin/org/example/kotlin/mixed/free/AdActivity.kt b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/kotlin/org/example/kotlin/mixed/free/AdActivity.kt
new file mode 100644
index 00000000..b0b980fd
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/kotlin/org/example/kotlin/mixed/free/AdActivity.kt
@@ -0,0 +1,14 @@
+package org.example.kotlin.mixed.free
+
+import android.os.Bundle
+import android.app.Activity
+import org.example.kotlin.mixed.R
+
+class AdActivity : Activity() {
+
+    override fun onCreate(savedInstanceState: Bundle?) {
+        super.onCreate(savedInstanceState)
+        setContentView(R.layout.activity_ad)
+    }
+
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/res/layout/activity_ad.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/res/layout/activity_ad.xml
new file mode 100644
index 00000000..e6443d05
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/res/layout/activity_ad.xml
@@ -0,0 +1,24 @@
+<LinearLayout xmlns:android="http://schemas.android.com/apk/res/android"
+    xmlns:tools="http://schemas.android.com/tools"
+    android:orientation="vertical"
+    android:layout_width="match_parent"
+    android:layout_height="match_parent"
+    android:paddingLeft="@dimen/activity_horizontal_margin"
+    android:paddingRight="@dimen/activity_horizontal_margin"
+    android:paddingTop="@dimen/activity_vertical_margin"
+    android:paddingBottom="@dimen/activity_vertical_margin"
+    tools:context=".free.AdActivity">
+
+    <TextView
+        android:layout_width="fill_parent"
+        android:layout_height="wrap_content"
+        android:text="Advertisment" />
+
+    <Button android:text="Next"
+        android:id="@+id/Button02"
+        android:layout_width="250px"
+        android:textSize="18px"
+        android:layout_height="55px">
+    </Button>
+
+</LinearLayout>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/res/values/strings.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/res/values/strings.xml
new file mode 100644
index 00000000..bbdf2d06
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/free/res/values/strings.xml
@@ -0,0 +1,3 @@
+<resources>
+    <string name="title_activity_ad">AdActivity</string>
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/AndroidManifest.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/AndroidManifest.xml
new file mode 100644
index 00000000..b4e1a892
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/AndroidManifest.xml
@@ -0,0 +1,26 @@
+<?xml version="1.0" encoding="utf-8"?>
+<manifest xmlns:android="http://schemas.android.com/apk/res/android"
+    package="org.example.kotlin.mixed" >
+
+    <application
+        android:allowBackup="true"
+        android:icon="@drawable/ic_launcher"
+        android:label="@string/app_name"
+        android:theme="@style/AppTheme" >
+
+        <activity
+            android:name=".JavaActivity"
+            android:label="@string/title_activity_main_activity1" >
+            <intent-filter>
+                <action android:name="android.intent.action.MAIN" />
+                <category android:name="android.intent.category.LAUNCHER" />
+            </intent-filter>
+        </activity>
+
+        <activity
+            android:name=".KotlinActivity"
+            android:label="@string/title_activity_main_activity2" />
+
+    </application>
+
+</manifest>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/java/org/example/kotlin/mixed/JavaActivity.java b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/java/org/example/kotlin/mixed/JavaActivity.java
new file mode 100644
index 00000000..3668c594
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/java/org/example/kotlin/mixed/JavaActivity.java
@@ -0,0 +1,34 @@
+package org.example.kotlin.mixed;
+
+import android.content.Intent;
+import android.os.Bundle;
+import android.app.Activity;
+import android.view.Menu;
+import android.view.View;
+import android.widget.Button;
+
+public class JavaActivity extends Activity {
+
+    @Override
+    protected void onCreate(Bundle savedInstanceState) {
+        super.onCreate(savedInstanceState);
+        setContentView(R.layout.activity_main);
+
+        Button next = (Button) findViewById(R.id.Button01);
+        next.setOnClickListener(new View.OnClickListener() {
+            public void onClick(View view) {
+                Intent myIntent = new Intent(view.getContext(), KotlinActivity.class);
+                startActivityForResult(myIntent, 0);
+            }
+        });
+    }
+
+
+    @Override
+    public boolean onCreateOptionsMenu(Menu menu) {
+        // Inflate the menu; this adds items to the action bar if it is present.
+        getMenuInflater().inflate(R.menu.main, menu);
+        return true;
+    }
+    
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/kotlin/org/example/kotlin/mixed/KotlinActivity.kt b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/kotlin/org/example/kotlin/mixed/KotlinActivity.kt
new file mode 100644
index 00000000..ca2f27b0
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/kotlin/org/example/kotlin/mixed/KotlinActivity.kt
@@ -0,0 +1,28 @@
+package org.example.kotlin.mixed
+
+import android.content.Intent
+import android.os.Bundle
+import android.app.Activity
+import android.view.Menu
+import android.widget.Button
+
+class KotlinActivity : Activity() {
+
+    override fun onCreate(savedInstanceState: Bundle?) {
+        super.onCreate(savedInstanceState)
+        setContentView(R.layout.activity_main2)
+
+        val next = findViewById(R.id.Button02) as Button
+        next.setOnClickListener {
+            val intent: Intent = Intent()
+            setResult(RESULT_OK, intent)
+            finish()
+        }
+    }
+
+    override fun onCreateOptionsMenu(menu: Menu?): Boolean {
+        // Inflate the menu; this adds items to the action bar if it is present.
+        menuInflater.inflate(R.menu.main_activity2, menu)
+        return true
+    }
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/drawable-hdpi/ic_launcher.png b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/drawable-hdpi/ic_launcher.png
new file mode 100644
index 00000000..96a442e5
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/drawable-hdpi/ic_launcher.png
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/drawable-mdpi/ic_launcher.png b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/drawable-mdpi/ic_launcher.png
new file mode 100644
index 00000000..359047df
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/drawable-mdpi/ic_launcher.png
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/drawable-xhdpi/ic_launcher.png b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/drawable-xhdpi/ic_launcher.png
new file mode 100644
index 00000000..71c6d760
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/drawable-xhdpi/ic_launcher.png
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/layout/activity_main.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/layout/activity_main.xml
new file mode 100644
index 00000000..ede57c39
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/layout/activity_main.xml
@@ -0,0 +1,24 @@
+<LinearLayout xmlns:android="http://schemas.android.com/apk/res/android"
+    xmlns:tools="http://schemas.android.com/tools"
+    android:orientation="vertical"
+    android:layout_width="match_parent"
+    android:layout_height="match_parent"
+    android:paddingLeft="@dimen/activity_horizontal_margin"
+    android:paddingRight="@dimen/activity_horizontal_margin"
+    android:paddingTop="@dimen/activity_vertical_margin"
+    android:paddingBottom="@dimen/activity_vertical_margin"
+    tools:context=".MainActivity">
+
+    <TextView
+        android:layout_width="fill_parent"
+        android:layout_height="wrap_content"
+        android:text="Activity 1" />
+
+    <Button android:text="Next"
+            android:id="@+id/Button01"
+            android:layout_width="250px"
+            android:textSize="18px"
+            android:layout_height="55px">
+    </Button>
+
+</LinearLayout>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/layout/activity_main2.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/layout/activity_main2.xml
new file mode 100644
index 00000000..d707536a
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/layout/activity_main2.xml
@@ -0,0 +1,24 @@
+<LinearLayout xmlns:android="http://schemas.android.com/apk/res/android"
+              xmlns:tools="http://schemas.android.com/tools"
+              android:orientation="vertical"
+              android:layout_width="match_parent"
+              android:layout_height="match_parent"
+              android:paddingLeft="@dimen/activity_horizontal_margin"
+              android:paddingRight="@dimen/activity_horizontal_margin"
+              android:paddingTop="@dimen/activity_vertical_margin"
+              android:paddingBottom="@dimen/activity_vertical_margin"
+              tools:context=".MainActivity">
+
+    <TextView
+            android:layout_width="fill_parent"
+            android:layout_height="wrap_content"
+            android:text="Activity 2" />
+
+    <Button android:text="Next"
+            android:id="@+id/Button02"
+            android:layout_width="250px"
+            android:textSize="18px"
+            android:layout_height="55px">
+    </Button>
+
+</LinearLayout>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/menu/main.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/menu/main.xml
new file mode 100644
index 00000000..f3b10b6c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/menu/main.xml
@@ -0,0 +1,6 @@
+<menu xmlns:android="http://schemas.android.com/apk/res/android">
+    <item android:id="@+id/action_settings"
+        android:title="@string/action_settings"
+        android:orderInCategory="100"
+        android:showAsAction="never" />
+</menu>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/menu/main_activity2.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/menu/main_activity2.xml
new file mode 100644
index 00000000..f3b10b6c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/menu/main_activity2.xml
@@ -0,0 +1,6 @@
+<menu xmlns:android="http://schemas.android.com/apk/res/android">
+    <item android:id="@+id/action_settings"
+        android:title="@string/action_settings"
+        android:orderInCategory="100"
+        android:showAsAction="never" />
+</menu>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/values/dimens.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/values/dimens.xml
new file mode 100644
index 00000000..47c82246
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/values/dimens.xml
@@ -0,0 +1,5 @@
+<resources>
+    <!-- Default screen margins, per the Android Design guidelines. -->
+    <dimen name="activity_horizontal_margin">16dp</dimen>
+    <dimen name="activity_vertical_margin">16dp</dimen>
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/values/strings.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/values/strings.xml
new file mode 100644
index 00000000..d8f08bc2
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/values/strings.xml
@@ -0,0 +1,10 @@
+<?xml version="1.0" encoding="utf-8"?>
+<resources>
+
+    <string name="app_name">AndroidSample</string>
+    <string name="action_settings">Settings</string>
+    <string name="hello_world">Hello world!</string>
+    <string name="title_activity_main_activity1">JavaActivity</string>
+    <string name="title_activity_main_activity2">KotlinActivity</string>
+
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/values/styles.xml b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/values/styles.xml
new file mode 100644
index 00000000..6ce89c7b
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/app/src/main/res/values/styles.xml
@@ -0,0 +1,20 @@
+<resources>
+
+    <!--
+        Base application theme, dependent on API level. This theme is replaced
+        by AppBaseTheme from res/values-vXX/styles.xml on newer devices.
+    -->
+    <style name="AppBaseTheme" parent="android:Theme.Light">
+        <!--
+            Theme customizations available in newer API levels can go in
+            res/values-vXX/styles.xml, while customizations related to
+            backward-compatibility can go here.
+        -->
+    </style>
+
+    <!-- Application theme. -->
+    <style name="AppTheme" parent="AppBaseTheme">
+        <!-- All customizations that are NOT specific to a particular API-level can go here. -->
+    </style>
+
+</resources>
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/build.gradle b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/build.gradle
new file mode 100644
index 00000000..35356b90
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/build.gradle
@@ -0,0 +1,21 @@
+buildscript {
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url 'https://maven.google.com' }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+    dependencies {
+        classpath "com.android.tools.build:gradle:$abt_plugin_version"
+    }
+}
+
+allprojects {
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+}
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/fileTree.txt b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/fileTree.txt
new file mode 100644
index 00000000..77b563b2
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/fileTree.txt
@@ -0,0 +1,47 @@
+/
+    all/
+        app/
+            alltypes/
+                index.html
+            index-outline.html
+            index.html
+            org.example.kotlin.mixed/
+                -java-activity/
+                    -init-.html
+                    index.html
+                    on-create-options-menu.html
+                    on-create.html
+                -kotlin-activity/
+                    -init-.html
+                    index.html
+                    on-create-options-menu.html
+                    on-create.html
+                index.html
+            org.example.kotlin.mixed.free/
+                -ad-activity/
+                    -init-.html
+                    index.html
+                    on-create.html
+                index.html
+            package-list
+        style.css
+    fullOnly/
+        full/
+            alltypes/
+                index.html
+            index-outline.html
+            index.html
+            org.example.kotlin.mixed/
+                -java-activity/
+                    -init-.html
+                    index.html
+                    on-create-options-menu.html
+                    on-create.html
+                -kotlin-activity/
+                    -init-.html
+                    index.html
+                    on-create-options-menu.html
+                    on-create.html
+                index.html
+            package-list
+        style.css
diff --git a/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/settings.gradle b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/settings.gradle
new file mode 100644
index 00000000..1feb2867
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/androidMultiFlavourApp/settings.gradle
@@ -0,0 +1,3 @@
+rootProject.name = "androidApp"
+
+include ':app'
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/basic/build.gradle b/integration-tests/gradle-integration-tests/testData/basic/build.gradle
new file mode 100644
index 00000000..79645204
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/basic/build.gradle
@@ -0,0 +1,42 @@
+buildscript {
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+    dependencies {
+        classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$test_kotlin_version"
+    }
+}
+
+plugins {
+    id 'org.jetbrains.dokka'
+}
+
+apply plugin: 'kotlin'
+apply plugin: 'org.jetbrains.dokka'
+
+repositories {
+    mavenCentral()
+    jcenter()
+    maven {
+        url "https://dl.bintray.com/kotlin/kotlin-eap-1.1"
+    }
+    maven {
+        url "https://dl.bintray.com/kotlin/kotlin-dev"
+    }
+}
+
+dependencies {
+    dokkaRuntime files(dokka_fatjar)
+    compile group: 'org.jetbrains.kotlin', name: 'kotlin-runtime', version: test_kotlin_version
+    compile group: 'org.jetbrains.kotlin', name: 'kotlin-reflect', version: test_kotlin_version
+}
+
+
+dokka {
+    configuration {
+        classpath += "$projectDir/classDir"
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/basic/classDir/p1/MyBinaryClass.class b/integration-tests/gradle-integration-tests/testData/basic/classDir/p1/MyBinaryClass.class
new file mode 100644
index 00000000..ccfff300
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/basic/classDir/p1/MyBinaryClass.class
diff --git a/integration-tests/gradle-integration-tests/testData/basic/fileTree.txt b/integration-tests/gradle-integration-tests/testData/basic/fileTree.txt
new file mode 100644
index 00000000..2ceae371
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/basic/fileTree.txt
@@ -0,0 +1,33 @@
+/
+    basic/
+        alltypes/
+            index.html
+        demo/
+            -a/
+                -init-.html
+                index.html
+                p.html
+            -greeter/
+                -init-.html
+                greet.html
+                index.html
+                name.html
+            -some-interface.html
+            -some-sub-type/
+                -init-.html
+                index.html
+            -some-type/
+                -init-.html
+                index.html
+            constructor.html
+            index.html
+            main.html
+            p1.-my-binary-class/
+                index.html
+                test.html
+            str.html
+            x.html
+        index-outline.html
+        index.html
+        package-list
+    style.css
diff --git a/integration-tests/gradle-integration-tests/testData/basic/settings.gradle b/integration-tests/gradle-integration-tests/testData/basic/settings.gradle
new file mode 100644
index 00000000..c36a146c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/basic/settings.gradle
@@ -0,0 +1 @@
+rootProject.name = "basic"
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/basic/src/main/kotlin/demo/HelloWorld.kt b/integration-tests/gradle-integration-tests/testData/basic/src/main/kotlin/demo/HelloWorld.kt
new file mode 100644
index 00000000..3d7bcb51
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/basic/src/main/kotlin/demo/HelloWorld.kt
@@ -0,0 +1,45 @@
+package demo
+
+import p1.MyBinaryClass
+
+/**
+ * This class supports greeting people by name.
+ *
+ * @property name The name of the person to be greeted.
+ */
+class Greeter(val name: String) {
+
+    /**
+     * Prints the greeting to the standard output.
+     */
+    fun greet() {
+        println("Hello $name!")
+    }
+}
+
+fun main(args: Array<String>) {
+    Greeter(args[0]).greet()
+}
+
+val str = "Hello! ".repeat(4)
+val x: (a: String, b: Int) -> Int = { a, b -> 0 }
+
+interface SomeInterface
+private class SomeImpl : SomeInterface
+
+fun SomeInterface.constructor(): SomeInterface {
+    return SomeImpl()
+}
+
+open class SomeType
+class SomeSubType : SomeType()
+
+fun SomeType.constructor(): SomeType {
+    return SomeSubType()
+}
+
+
+annotation class A(val p: String)
+
+val MyBinaryClass.test get() = s()
+
diff --git a/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/build.gradle b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/build.gradle
new file mode 100644
index 00000000..0ea86d4c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/build.gradle
@@ -0,0 +1,37 @@
+plugins {
+    id 'org.jetbrains.dokka'
+}
+
+subprojects {
+    buildscript {
+        repositories {
+            mavenCentral()
+            jcenter()
+            maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+            maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+        }
+        dependencies {
+            classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$test_kotlin_version"
+        }
+    }
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+}
+
+dependencies {
+    dokkaRuntime files(dokka_fatjar)
+}
+
+apply plugin: 'org.jetbrains.dokka'
+
+dokka {
+    configuration {
+        kotlinTasks {
+            [":subA:compileKotlin", ":subB:compileKotlin"]
+        }
+    }
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/fileTree.txt b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/fileTree.txt
new file mode 100644
index 00000000..5624fca6
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/fileTree.txt
@@ -0,0 +1,33 @@
+/
+    multi-project-root/
+        alltypes/
+            index.html
+        index-outline.html
+        index.html
+        package-list
+        s1/
+            -my-class/
+                -init-.html
+                index.html
+                otherworks.html
+            -super/
+                -init-.html
+                bar.html
+                foo.html
+                index.html
+            index.html
+            some-cool-thing.html
+        s2/
+            -cooler/
+                -init-.html
+                a.html
+                coolest.html
+                index.html
+                my-class.html
+            -superful/
+                -init-.html
+                bar.html
+                index.html
+            index.html
+            main.html
+    style.css
diff --git a/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/settings.gradle b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/settings.gradle
new file mode 100644
index 00000000..283cc526
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/settings.gradle
@@ -0,0 +1,3 @@
+rootProject.name = "multiProjectRoot"
+
+include 'subA', 'subB'
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subA/build.gradle b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subA/build.gradle
new file mode 100644
index 00000000..0600411e
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subA/build.gradle
@@ -0,0 +1,6 @@
+apply plugin: 'kotlin'
+
+dependencies {
+    compile group: 'org.jetbrains.kotlin', name: 'kotlin-runtime', version: test_kotlin_version
+    compile group: 'org.jetbrains.kotlin', name: 'kotlin-reflect', version: test_kotlin_version
+}
diff --git a/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subA/src/main/kotlin/module.kt b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subA/src/main/kotlin/module.kt
new file mode 100644
index 00000000..126d7f3e
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subA/src/main/kotlin/module.kt
@@ -0,0 +1,31 @@
+package s1
+
+/**
+ * Coolest one
+ */
+fun someCoolThing(s: String) = s.repeat(2)
+
+/**
+ * Just a class
+ */
+class MyClass {
+    /**
+     * Ultimate answer to all questions
+     */
+    fun otherworks(): Int = 42
+}
+
+/**
+ * Just a SUPER class
+ */
+open class Super {
+    /**
+     * Same as [MyClass.otherworks]
+     */
+    fun foo(i: Int = 21) = i * 2
+
+    /**
+     * magic
+     */
+    open fun bar() = foo()
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subB/build.gradle b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subB/build.gradle
new file mode 100644
index 00000000..7b8ff9f3
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subB/build.gradle
@@ -0,0 +1,7 @@
+apply plugin: 'kotlin'
+
+dependencies {
+    compile group: 'org.jetbrains.kotlin', name: 'kotlin-runtime', version: test_kotlin_version
+    compile group: 'org.jetbrains.kotlin', name: 'kotlin-reflect', version: test_kotlin_version
+    compile project(":subA")
+}
diff --git a/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subB/src/main/kotlin/module.kt b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subB/src/main/kotlin/module.kt
new file mode 100644
index 00000000..8a87590a
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiProjectSingleOut/subB/src/main/kotlin/module.kt
@@ -0,0 +1,31 @@
+package s2
+
+import s1.Super
+import s1.MyClass
+import s1.someCoolThing
+
+/**
+ * Just an entry-point
+ */
+fun main(args: Array<String>) {
+
+}
+
+/**
+ * Take a glass of hot water
+ */
+class Cooler {
+    val myClass = MyClass()
+    val a = myClass.otherworks()
+    val coolest = someCoolThing()
+}
+
+/**
+ * Powerful
+ */
+class Superful : Super() {
+    /**
+     * Overriden magic
+     */
+    override fun bar() = foo(20) * 2
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/multiplatformProject/build.gradle b/integration-tests/gradle-integration-tests/testData/multiplatformProject/build.gradle
new file mode 100644
index 00000000..b5454c55
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiplatformProject/build.gradle
@@ -0,0 +1,60 @@
+buildscript {
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+    dependencies {
+        classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$test_kotlin_version"
+    }
+}
+
+plugins {
+    id 'org.jetbrains.dokka'
+}
+
+repositories {
+    jcenter()
+    mavenLocal()
+}
+
+group 'org.test'
+version '1.0-SNAPSHOT'
+
+apply plugin: "org.jetbrains.kotlin.multiplatform"
+
+kotlin {
+    jvm() // Create a JVM target with the default name 'jvm'
+    js()
+    sourceSets {
+        jsMain {
+            dependencies{
+                implementation "org.jetbrains.kotlin:kotlin-stdlib-js"
+            }
+        }
+        jvmMain {
+            dependencies {
+                implementation kotlin('stdlib-jdk8')
+            }
+        }
+    }
+}
+
+dependencies {
+    dokkaRuntime files(dokka_fatjar)
+}
+
+apply plugin: 'org.jetbrains.dokka'
+
+dokka {
+
+    multiplatform {
+        javascript {
+            targets = ["js"]
+            platform = "js"
+            kotlinTasks { [tasks.getByPath(":compileKotlinJs")] }
+        }
+        jvm {}
+    }
+}
diff --git a/integration-tests/gradle-integration-tests/testData/multiplatformProject/fileTree.txt b/integration-tests/gradle-integration-tests/testData/multiplatformProject/fileTree.txt
new file mode 100644
index 00000000..e9cc847c
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiplatformProject/fileTree.txt
@@ -0,0 +1,18 @@
+/
+    multiplatform-project-root/
+        alltypes/
+            index.html
+        index-outline.html
+        index.html
+        org.kotlintestmpp/
+            get-current-date.html
+            index.html
+            js.html
+            jvm.html
+            kotlin.-string/
+                index.html
+                my-extension.html
+            main.html
+            shared.html
+        package-list
+    style.css
diff --git a/integration-tests/gradle-integration-tests/testData/multiplatformProject/settings.gradle b/integration-tests/gradle-integration-tests/testData/multiplatformProject/settings.gradle
new file mode 100644
index 00000000..0bb1e91b
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiplatformProject/settings.gradle
@@ -0,0 +1 @@
+rootProject.name = "multiplatformProjectRoot"
diff --git a/integration-tests/gradle-integration-tests/testData/multiplatformProject/src/jsMain/kotlin/org/kotlintestmpp/main.kt b/integration-tests/gradle-integration-tests/testData/multiplatformProject/src/jsMain/kotlin/org/kotlintestmpp/main.kt
new file mode 100644
index 00000000..a77b50f9
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiplatformProject/src/jsMain/kotlin/org/kotlintestmpp/main.kt
@@ -0,0 +1,14 @@
+package org.kotlintestmpp
+
+fun main(args : Array<String>) {
+    console.log("Hello, world!")
+}
+
+fun js(){}
+fun shared(){}
+
+fun getCurrentDate(): String {
+    return "test"
+}
+
+fun String.myExtension() = println("test")
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/multiplatformProject/src/jvmMain/kotlin/org/kotlintestmpp/main.kt b/integration-tests/gradle-integration-tests/testData/multiplatformProject/src/jvmMain/kotlin/org/kotlintestmpp/main.kt
new file mode 100644
index 00000000..96d725fc
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/multiplatformProject/src/jvmMain/kotlin/org/kotlintestmpp/main.kt
@@ -0,0 +1,20 @@
+package org.kotlintestmpp
+
+
+fun main(args : Array<String>) {
+    println("Hello, world!")
+}
+
+/**
+ * comment for this class
+ */
+fun jvm(){}
+fun shared(){}
+
+fun getCurrentDate(): String {
+    return "test"
+}
+
+fun String.myExtension() = println("test2")
+
+
diff --git a/integration-tests/gradle-integration-tests/testData/sourcesChange/build.gradle b/integration-tests/gradle-integration-tests/testData/sourcesChange/build.gradle
new file mode 100644
index 00000000..a6270e23
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/sourcesChange/build.gradle
@@ -0,0 +1,35 @@
+buildscript {
+    repositories {
+        mavenCentral()
+        jcenter()
+        maven { url "https://dl.bintray.com/kotlin/kotlin-eap-1.1" }
+        maven { url "https://dl.bintray.com/kotlin/kotlin-dev" }
+    }
+    dependencies {
+        classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$test_kotlin_version"
+    }
+}
+
+plugins {
+    id 'org.jetbrains.dokka'
+}
+
+apply plugin: 'kotlin'
+apply plugin: 'org.jetbrains.dokka'
+
+repositories {
+    mavenCentral()
+    jcenter()
+    maven {
+        url "https://dl.bintray.com/kotlin/kotlin-eap-1.1"
+    }
+    maven {
+        url "https://dl.bintray.com/kotlin/kotlin-dev"
+    }
+}
+
+dependencies {
+    dokkaRuntime files(dokka_fatjar)
+    compile group: 'org.jetbrains.kotlin', name: 'kotlin-runtime', version: test_kotlin_version
+    compile group: 'org.jetbrains.kotlin', name: 'kotlin-reflect', version: test_kotlin_version
+}
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/sourcesChange/fileTree.txt b/integration-tests/gradle-integration-tests/testData/sourcesChange/fileTree.txt
new file mode 100644
index 00000000..09f3724b
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/sourcesChange/fileTree.txt
@@ -0,0 +1,10 @@
+/
+    sources-change/
+        alltypes.html
+        demo/
+            hello.html
+            index.html
+        index-outline.html
+        index.html
+        package-list
+    style.css
diff --git a/integration-tests/gradle-integration-tests/testData/sourcesChange/fileTree1.txt b/integration-tests/gradle-integration-tests/testData/sourcesChange/fileTree1.txt
new file mode 100644
index 00000000..eeb377f7
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/sourcesChange/fileTree1.txt
@@ -0,0 +1,11 @@
+/
+    sources-change/
+        alltypes.html
+        demo/
+            hello.html
+            index.html
+            world.html
+        index-outline.html
+        index.html
+        package-list
+    style.css
diff --git a/integration-tests/gradle-integration-tests/testData/sourcesChange/settings.gradle b/integration-tests/gradle-integration-tests/testData/sourcesChange/settings.gradle
new file mode 100644
index 00000000..3fb032bf
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/sourcesChange/settings.gradle
@@ -0,0 +1 @@
+rootProject.name = "sourcesChange"
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/sourcesChange/src/main/kotlin/demo/HelloWorld.kt b/integration-tests/gradle-integration-tests/testData/sourcesChange/src/main/kotlin/demo/HelloWorld.kt
new file mode 100644
index 00000000..c54dea50
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/sourcesChange/src/main/kotlin/demo/HelloWorld.kt
@@ -0,0 +1,6 @@
+package demo
+
+/**
+ * @return Hello
+ */
+fun hello(): String = "Hello"
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/sourcesChange/src1/main/kotlin/demo/HelloWorld.kt b/integration-tests/gradle-integration-tests/testData/sourcesChange/src1/main/kotlin/demo/HelloWorld.kt
new file mode 100644
index 00000000..53f22ff5
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/sourcesChange/src1/main/kotlin/demo/HelloWorld.kt
@@ -0,0 +1,11 @@
+package demo
+
+/**
+ * @return Hello
+ */
+fun hello(): String = "Hello"
+
+/**
+ * @return World
+ */
+fun world(): String = "World"
\ No newline at end of file
diff --git a/integration-tests/gradle-integration-tests/testData/typeSafeConfiguration/build.gradle b/integration-tests/gradle-integration-tests/testData/typeSafeConfiguration/build.gradle
new file mode 100644
index 00000000..8688ae41
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/typeSafeConfiguration/build.gradle
@@ -0,0 +1,73 @@
+import org.jetbrains.dokka.*
+import org.jetbrains.dokka.gradle.*
+import org.jetbrains.kotlin.gradle.tasks.*
+
+import groovy.transform.CompileStatic
+import java.util.concurrent.Callable
+
+buildscript {
+    repositories {
+        jcenter()
+        mavenLocal()
+    }
+    dependencies {
+        classpath "org.jetbrains.kotlin:kotlin-gradle-plugin:$test_kotlin_version"
+    }
+}
+
+plugins {
+    id 'org.jetbrains.dokka'
+}
+
+apply plugin: 'kotlin'
+
+@CompileStatic
+def configureDokkaTypeSafely(DokkaTask dokka) {
+    dokka.with {
+        outputFormat = "some String"
+        outputDirectory = "some String"
+        cacheRoot = null as String
+        impliedPlatforms = new ArrayList<String>()
+    }
+    dokka.configuration.with {
+        moduleName = "some String"
+        classpath = Arrays.asList("someClassDir")
+        includes = Collections.<String> emptyList()
+        samples = Collections.<String> emptyList()
+        jdkVersion = 6
+        sourceRoots = new ArrayList<GradleSourceRootImpl>() as List<DokkaConfiguration.SourceRoot>
+
+        includeNonPublic = false
+        skipDeprecated = false
+        skipEmptyPackages = true
+        reportUndocumented = true
+        perPackageOptions = new ArrayList<GradlePackageOptionsImpl>() as List<DokkaConfiguration.PackageOptions>
+        externalDocumentationLinks = new ArrayList<DokkaConfiguration.ExternalDocumentationLink>()
+        noStdlibLink = false
+        languageVersion = null as String
+        apiVersion = null as String
+        sourceRoot(new Action<GradleSourceRootImpl>() {
+            @Override
+            void execute(GradleSourceRootImpl sourceRoot) {
+                sourceRoot.path = "some String"
+            }
+        })
+        externalDocumentationLink(new Action<GradleExternalDocumentationLinkImpl>() {
+            @Override
+            void execute(GradleExternalDocumentationLinkImpl link) {
+                link.url = uri("some URI").toURL()
+                link.packageListUrl = uri("some URI").toURL()
+            }
+        })
+        kotlinTasks(new Callable<List<Object>>() {
+            @Override
+            List<Object> call() {
+                return defaultKotlinTasks()
+            }
+        })
+    }
+}
+
+project.tasks.withType(DokkaTask) { dokka ->
+    configureDokkaTypeSafely(dokka)
+}
diff --git a/integration-tests/gradle-integration-tests/testData/typeSafeConfiguration/settings.gradle b/integration-tests/gradle-integration-tests/testData/typeSafeConfiguration/settings.gradle
new file mode 100644
index 00000000..be82e328
--- /dev/null
+++ b/integration-tests/gradle-integration-tests/testData/typeSafeConfiguration/settings.gradle
@@ -0,0 +1 @@
+rootProject.name = "type-safe-configuration"
\ No newline at end of file